Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBE2NP61088 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2NP61088 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 AC091390.4-202ENST00000476426 537 ntBASIC16.79■□□□□ 0.28
UBE2NP61088 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.79■□□□□ 0.28
UBE2NP61088 AC097488.1-201ENST00000507834 756 ntBASIC16.79■□□□□ 0.28
UBE2NP61088 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.79■□□□□ 0.28
UBE2NP61088 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.79■□□□□ 0.28
UBE2NP61088 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2NP61088 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2NP61088 AP000525.1-201ENST00000608286 694 ntBASIC16.79■□□□□ 0.28
UBE2NP61088 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBE2NP61088 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2NP61088 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2NP61088 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2NP61088 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2NP61088 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2NP61088 Z82202.1-201ENST00000623446 1880 ntBASIC16.78■□□□□ 0.28
UBE2NP61088 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2NP61088 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2NP61088 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2NP61088 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2NP61088 MIR1238-201ENST00000408483 83 ntBASIC16.78■□□□□ 0.28
UBE2NP61088 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2NP61088 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2NP61088 BX088651.1-201ENST00000540551 451 ntBASIC16.78■□□□□ 0.28
UBE2NP61088 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2NP61088 AP000692.2-201ENST00000608391 879 ntBASIC16.78■□□□□ 0.28
UBE2NP61088 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2NP61088 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2NP61088 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBE2NP61088 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
UBE2NP61088 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UBE2NP61088 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2NP61088 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2NP61088 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2NP61088 SDHAP1-207ENST00000440850 2000 ntBASIC16.77■□□□□ 0.28
UBE2NP61088 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2NP61088 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
UBE2NP61088 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
UBE2NP61088 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2NP61088 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE2NP61088 MESTP1-201ENST00000404287 994 ntBASIC16.77■□□□□ 0.28
UBE2NP61088 CRYGFP-201ENST00000418459 633 ntBASIC16.77■□□□□ 0.28
UBE2NP61088 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.77■□□□□ 0.28
UBE2NP61088 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.77■□□□□ 0.28
UBE2NP61088 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBE2NP61088 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.77■□□□□ 0.28
UBE2NP61088 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
UBE2NP61088 AC073912.3-201ENST00000624414 853 ntBASIC16.77■□□□□ 0.28
UBE2NP61088 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.77■□□□□ 0.28
UBE2NP61088 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.77■□□□□ 0.28
UBE2NP61088 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
UBE2NP61088 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2NP61088 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.77■□□□□ 0.27
UBE2NP61088 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2NP61088 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2NP61088 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
UBE2NP61088 KRT8P41-201ENST00000533985 1514 ntBASIC16.76■□□□□ 0.27
UBE2NP61088 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2NP61088 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2NP61088 MMP23A-201ENST00000234610 1017 ntBASIC16.76■□□□□ 0.27
UBE2NP61088 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBE2NP61088 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 TSPY21P-201ENST00000433481 731 ntBASIC16.76■□□□□ 0.27
UBE2NP61088 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2NP61088 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.76■□□□□ 0.27
UBE2NP61088 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.76■□□□□ 0.27
UBE2NP61088 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UBE2NP61088 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2NP61088 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBE2NP61088 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2NP61088 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2NP61088 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2NP61088 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2NP61088 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2NP61088 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE2NP61088 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
UBE2NP61088 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2NP61088 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms