Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
ERVFC1P60507 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ERVFC1P60507 AC004870.1-201ENST00000315132 882 ntBASIC20.08■□□□□ 0.81
ERVFC1P60507 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ERVFC1P60507 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ERVFC1P60507 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
ERVFC1P60507 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ERVFC1P60507 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.08■□□□□ 0.81
ERVFC1P60507 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.08■□□□□ 0.81
ERVFC1P60507 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.08■□□□□ 0.81
ERVFC1P60507 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.08■□□□□ 0.81
ERVFC1P60507 AL157888.1-201ENST00000631930 593 ntBASIC20.08■□□□□ 0.81
ERVFC1P60507 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ERVFC1P60507 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
ERVFC1P60507 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ERVFC1P60507 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.08■□□□□ 0.8
ERVFC1P60507 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ERVFC1P60507 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.07■□□□□ 0.8
ERVFC1P60507 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 AC092667.1-201ENST00000434301 2586 ntBASIC20.07■□□□□ 0.8
ERVFC1P60507 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.07■□□□□ 0.8
ERVFC1P60507 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 PVRIG2P-201ENST00000435460 978 ntBASIC20.07■□□□□ 0.8
ERVFC1P60507 KRT8P26-201ENST00000534154 1276 ntBASIC20.07■□□□□ 0.8
ERVFC1P60507 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.07■□□□□ 0.8
ERVFC1P60507 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 AL137060.1-201ENST00000618151 2648 ntBASIC20.07■□□□□ 0.8
ERVFC1P60507 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ERVFC1P60507 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.07■□□□□ 0.8
ERVFC1P60507 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ERVFC1P60507 GABARAPL3-202ENST00000624044 1851 ntBASIC20.07■□□□□ 0.8
ERVFC1P60507 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ERVFC1P60507 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERVFC1P60507 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
ERVFC1P60507 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 HLA-F-220ENST00000434407 884 ntBASIC20.06■□□□□ 0.8
ERVFC1P60507 AP000347.1-202ENST00000435868 847 ntBASIC20.06■□□□□ 0.8
ERVFC1P60507 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ERVFC1P60507 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.06■□□□□ 0.8
ERVFC1P60507 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.06■□□□□ 0.8
ERVFC1P60507 MIR3180-5-201ENST00000583743 153 ntBASIC20.06■□□□□ 0.8
ERVFC1P60507 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ERVFC1P60507 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.06■□□□□ 0.8
ERVFC1P60507 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.06■□□□□ 0.8
ERVFC1P60507 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERVFC1P60507 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.05■□□□□ 0.8
ERVFC1P60507 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ERVFC1P60507 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.05■□□□□ 0.8
ERVFC1P60507 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 KRT8P10-201ENST00000450021 1447 ntBASIC20.05■□□□□ 0.8
ERVFC1P60507 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.05■□□□□ 0.8
ERVFC1P60507 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.05■□□□□ 0.8
ERVFC1P60507 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.05■□□□□ 0.8
ERVFC1P60507 MCCD1P1-208ENST00000445732 328 ntBASIC20.05■□□□□ 0.8
ERVFC1P60507 KRT17P6-201ENST00000453795 1220 ntBASIC20.05■□□□□ 0.8
ERVFC1P60507 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.05■□□□□ 0.8
ERVFC1P60507 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ERVFC1P60507 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.05■□□□□ 0.8
ERVFC1P60507 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.05■□□□□ 0.8
ERVFC1P60507 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.05■□□□□ 0.8
ERVFC1P60507 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.05■□□□□ 0.8
ERVFC1P60507 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.05■□□□□ 0.8
ERVFC1P60507 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.05■□□□□ 0.8
ERVFC1P60507 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.05■□□□□ 0.8
ERVFC1P60507 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERVFC1P60507 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms