Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 AC004951.3-201ENST00000418645 1148 ntBASIC21.76■■□□□ 1.07
CHMP4BP1P59074 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP4BP1P59074 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 AC125437.2-201ENST00000625180 2167 ntBASIC21.75■■□□□ 1.07
CHMP4BP1P59074 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 TSPY14P-201ENST00000303979 915 ntBASIC21.75■■□□□ 1.07
CHMP4BP1P59074 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 MFAP1P1-201ENST00000442257 1255 ntBASIC21.75■■□□□ 1.07
CHMP4BP1P59074 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 AC006011.2-201ENST00000621313 1158 ntBASIC21.75■■□□□ 1.07
CHMP4BP1P59074 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 TMEM179-206ENST00000616017 1645 ntBASIC21.75■■□□□ 1.07
CHMP4BP1P59074 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 AL158211.5-201ENST00000623583 2518 ntBASIC21.75■■□□□ 1.07
CHMP4BP1P59074 TNXA-203ENST00000507684 2038 ntBASIC21.75■■□□□ 1.07
CHMP4BP1P59074 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP4BP1P59074 LINC01465-201ENST00000408887 1940 ntBASIC21.74■■□□□ 1.07
CHMP4BP1P59074 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 FAM207BP-201ENST00000447172 505 ntBASIC21.74■■□□□ 1.07
CHMP4BP1P59074 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP4BP1P59074 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP4BP1P59074 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms