Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APOC4P55056 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
APOC4P55056 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
APOC4P55056 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.98□□□□□ -0.17
APOC4P55056 AC007663.1-201ENST00000438948 1240 ntBASIC13.98□□□□□ -0.17
APOC4P55056 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.98□□□□□ -0.17
APOC4P55056 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 LINC01238-205ENST00000567549 1107 ntBASIC13.98□□□□□ -0.17
APOC4P55056 FAM87A-204ENST00000613235 858 ntBASIC13.98□□□□□ -0.17
APOC4P55056 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC4P55056 AL590326.2-201ENST00000625139 305 ntBASIC13.98□□□□□ -0.17
APOC4P55056 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC4P55056 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
APOC4P55056 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 AC092338.2-201ENST00000568827 1415 ntBASIC13.98□□□□□ -0.17
APOC4P55056 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC4P55056 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC4P55056 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
APOC4P55056 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
APOC4P55056 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOC4P55056 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC4P55056 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC4P55056 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
APOC4P55056 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 BX664615.1-201ENST00000443558 458 ntBASIC13.97□□□□□ -0.17
APOC4P55056 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
APOC4P55056 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC4P55056 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
APOC4P55056 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.97□□□□□ -0.17
APOC4P55056 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC4P55056 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOC4P55056 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC4P55056 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
APOC4P55056 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOC4P55056 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC4P55056 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC4P55056 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC4P55056 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
APOC4P55056 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
APOC4P55056 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
APOC4P55056 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 AP000523.1-201ENST00000398242 1049 ntBASIC13.96□□□□□ -0.17
APOC4P55056 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC4P55056 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms