Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL023284.2-201ENST00000405850 579 ntBASIC23.8■■□□□ 1.4
NUP98P52948 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.8■■□□□ 1.4
NUP98P52948 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.8■■□□□ 1.4
NUP98P52948 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.8■■□□□ 1.4
NUP98P52948 AL157888.1-201ENST00000631930 593 ntBASIC23.8■■□□□ 1.4
NUP98P52948 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUP98P52948 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUP98P52948 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
NUP98P52948 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.8■■□□□ 1.4
NUP98P52948 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUP98P52948 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUP98P52948 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.8■■□□□ 1.4
NUP98P52948 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NUP98P52948 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.8■■□□□ 1.4
NUP98P52948 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NUP98P52948 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NUP98P52948 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NUP98P52948 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NUP98P52948 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.79■■□□□ 1.4
NUP98P52948 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NUP98P52948 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.79■■□□□ 1.4
NUP98P52948 MCCD1P1-208ENST00000445732 328 ntBASIC23.79■■□□□ 1.4
NUP98P52948 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NUP98P52948 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NUP98P52948 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.79■■□□□ 1.4
NUP98P52948 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NUP98P52948 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.79■■□□□ 1.4
NUP98P52948 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.79■■□□□ 1.4
NUP98P52948 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NUP98P52948 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUP98P52948 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUP98P52948 CLDN5-201ENST00000403084 2357 ntBASIC23.78■■□□□ 1.4
NUP98P52948 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.78■■□□□ 1.4
NUP98P52948 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.78■■□□□ 1.4
NUP98P52948 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.78■■□□□ 1.4
NUP98P52948 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUP98P52948 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NUP98P52948 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NUP98P52948 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.78■■□□□ 1.4
NUP98P52948 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUP98P52948 LINC01521-201ENST00000504184 1943 ntBASIC23.78■■□□□ 1.4
NUP98P52948 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 TREX1-205ENST00000625293 1783 ntBASIC23.77■■□□□ 1.4
NUP98P52948 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.77■■□□□ 1.4
NUP98P52948 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.77■■□□□ 1.4
NUP98P52948 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.77■■□□□ 1.4
NUP98P52948 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.77■■□□□ 1.4
NUP98P52948 AC024243.1-201ENST00000609234 778 ntBASIC23.77■■□□□ 1.4
NUP98P52948 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.77■■□□□ 1.4
NUP98P52948 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
NUP98P52948 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.77■■□□□ 1.4
NUP98P52948 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NUP98P52948 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.76■■□□□ 1.39
NUP98P52948 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.76■■□□□ 1.39
NUP98P52948 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.76■■□□□ 1.39
NUP98P52948 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.76■■□□□ 1.39
NUP98P52948 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.76■■□□□ 1.39
NUP98P52948 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.76■■□□□ 1.39
NUP98P52948 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
NUP98P52948 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.76■■□□□ 1.39
NUP98P52948 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.76■■□□□ 1.39
NUP98P52948 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUP98P52948 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NUP98P52948 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NUP98P52948 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.75■■□□□ 1.39
NUP98P52948 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NUP98P52948 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.75■■□□□ 1.39
NUP98P52948 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.75■■□□□ 1.39
NUP98P52948 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NUP98P52948 AC079602.3-201ENST00000623931 403 ntBASIC23.75■■□□□ 1.39
NUP98P52948 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.75■■□□□ 1.39
NUP98P52948 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.75■■□□□ 1.39
NUP98P52948 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.75■■□□□ 1.39
NUP98P52948 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
NUP98P52948 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NUP98P52948 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NUP98P52948 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NUP98P52948 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.75■■□□□ 1.39
NUP98P52948 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.75■■□□□ 1.39
NUP98P52948 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NUP98P52948 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms