Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HMGA2P52926 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGA2P52926 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGA2P52926 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HMGA2P52926 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGA2P52926 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGA2P52926 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGA2P52926 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 PCDHB18P-201ENST00000524813 2368 ntBASIC17.42■□□□□ 0.38
HMGA2P52926 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGA2P52926 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HMGA2P52926 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 AC083906.2-201ENST00000511578 360 ntBASIC17.42■□□□□ 0.38
HMGA2P52926 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGA2P52926 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGA2P52926 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGA2P52926 MYC-209ENST00000641252 345 ntBASIC17.42■□□□□ 0.38
HMGA2P52926 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HMGA2P52926 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
HMGA2P52926 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGA2P52926 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.41■□□□□ 0.38
HMGA2P52926 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGA2P52926 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HMGA2P52926 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMGA2P52926 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HMGA2P52926 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HMGA2P52926 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 CROCCP5-201ENST00000436658 830 ntBASIC17.41■□□□□ 0.38
HMGA2P52926 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGA2P52926 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HMGA2P52926 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGA2P52926 AL121832.2-201ENST00000610979 668 ntBASIC17.41■□□□□ 0.38
HMGA2P52926 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HMGA2P52926 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGA2P52926 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGA2P52926 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGA2P52926 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGA2P52926 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGA2P52926 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGA2P52926 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 MIR663A-201ENST00000385250 93 ntBASIC17.4■□□□□ 0.38
HMGA2P52926 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HMGA2P52926 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGA2P52926 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 PNMA6B-201ENST00000538162 1200 ntBASIC17.4■□□□□ 0.38
HMGA2P52926 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGA2P52926 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 AC060766.5-201ENST00000590539 871 ntBASIC17.4■□□□□ 0.38
HMGA2P52926 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGA2P52926 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGA2P52926 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGA2P52926 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMGA2P52926 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGA2P52926 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGA2P52926 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms