Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCNKAP51800 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.71■□□□□ 0.59
CLCNKAP51800 AL353719.1-201ENST00000566847 864 ntBASIC18.71■□□□□ 0.59
CLCNKAP51800 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.71■□□□□ 0.59
CLCNKAP51800 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCNKAP51800 AC092338.2-201ENST00000568827 1415 ntBASIC18.71■□□□□ 0.59
CLCNKAP51800 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CLCNKAP51800 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCNKAP51800 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CLCNKAP51800 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLCNKAP51800 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCNKAP51800 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCNKAP51800 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCNKAP51800 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCNKAP51800 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLCNKAP51800 RCN1P1-201ENST00000400413 996 ntBASIC18.7■□□□□ 0.58
CLCNKAP51800 TSPY23P-201ENST00000440136 739 ntBASIC18.7■□□□□ 0.58
CLCNKAP51800 SLC25A3P1-201ENST00000443844 931 ntBASIC18.7■□□□□ 0.58
CLCNKAP51800 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.7■□□□□ 0.58
CLCNKAP51800 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLCNKAP51800 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCNKAP51800 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCNKAP51800 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CLCNKAP51800 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLCNKAP51800 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLCNKAP51800 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCNKAP51800 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLCNKAP51800 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLCNKAP51800 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLCNKAP51800 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 AC093484.2-201ENST00000580996 2166 ntBASIC18.69■□□□□ 0.58
CLCNKAP51800 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CLCNKAP51800 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCNKAP51800 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCNKAP51800 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCNKAP51800 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CLCNKAP51800 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCNKAP51800 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLCNKAP51800 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCNKAP51800 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLCNKAP51800 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLCNKAP51800 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLCNKAP51800 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCNKAP51800 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 AC073508.3-201ENST00000619697 1419 ntBASIC18.68■□□□□ 0.58
CLCNKAP51800 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCNKAP51800 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCNKAP51800 AC007663.1-201ENST00000438948 1240 ntBASIC18.68■□□□□ 0.58
CLCNKAP51800 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLCNKAP51800 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLCNKAP51800 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 FAM87A-204ENST00000613235 858 ntBASIC18.68■□□□□ 0.58
CLCNKAP51800 AC092865.7-201ENST00000641832 219 ntBASIC18.68■□□□□ 0.58
CLCNKAP51800 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CLCNKAP51800 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCNKAP51800 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCNKAP51800 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCNKAP51800 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLCNKAP51800 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CLCNKAP51800 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLCNKAP51800 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CLCNKAP51800 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CLCNKAP51800 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCNKAP51800 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms