Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.15■□□□□ 0.98
CPT1AP50416 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.15■□□□□ 0.98
CPT1AP50416 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPT1AP50416 AC092597.1-201ENST00000487352 616 ntBASIC21.15■□□□□ 0.98
CPT1AP50416 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.15■□□□□ 0.98
CPT1AP50416 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPT1AP50416 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CPT1AP50416 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.15■□□□□ 0.98
CPT1AP50416 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CPT1AP50416 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CPT1AP50416 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPT1AP50416 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPT1AP50416 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPT1AP50416 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.14■□□□□ 0.98
CPT1AP50416 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPT1AP50416 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPT1AP50416 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPT1AP50416 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.14■□□□□ 0.97
CPT1AP50416 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPT1AP50416 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CPT1AP50416 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPT1AP50416 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.14■□□□□ 0.97
CPT1AP50416 TPM4P1-201ENST00000436100 807 ntBASIC21.14■□□□□ 0.97
CPT1AP50416 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPT1AP50416 AL691432.3-201ENST00000621860 400 ntBASIC21.14■□□□□ 0.97
CPT1AP50416 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPT1AP50416 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.14■□□□□ 0.97
CPT1AP50416 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.14■□□□□ 0.97
CPT1AP50416 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPT1AP50416 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.13■□□□□ 0.97
CPT1AP50416 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CPT1AP50416 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.13■□□□□ 0.97
CPT1AP50416 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPT1AP50416 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.13■□□□□ 0.97
CPT1AP50416 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.13■□□□□ 0.97
CPT1AP50416 KRT8P3-201ENST00000519669 1449 ntBASIC21.12■□□□□ 0.97
CPT1AP50416 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CPT1AP50416 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.12■□□□□ 0.97
CPT1AP50416 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.12■□□□□ 0.97
CPT1AP50416 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.12■□□□□ 0.97
CPT1AP50416 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.12■□□□□ 0.97
CPT1AP50416 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.12■□□□□ 0.97
CPT1AP50416 NPAP1P7-201ENST00000613027 823 ntBASIC21.12■□□□□ 0.97
CPT1AP50416 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.12■□□□□ 0.97
CPT1AP50416 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.12■□□□□ 0.97
CPT1AP50416 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPT1AP50416 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.11■□□□□ 0.97
CPT1AP50416 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.11■□□□□ 0.97
CPT1AP50416 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CPT1AP50416 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CPT1AP50416 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CPT1AP50416 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CPT1AP50416 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.11■□□□□ 0.97
CPT1AP50416 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPT1AP50416 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.11■□□□□ 0.97
CPT1AP50416 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CPT1AP50416 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms