Protein–RNA interactions for Protein: P49221

TGM4, Protein-glutamine gamma-glutamyltransferase 4, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGM4P49221 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TGM4P49221 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.1■□□□□ 0.33
TGM4P49221 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.1■□□□□ 0.33
TGM4P49221 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.1■□□□□ 0.33
TGM4P49221 NCF1B-203ENST00000435988 1254 ntBASIC17.1■□□□□ 0.33
TGM4P49221 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
TGM4P49221 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.1■□□□□ 0.33
TGM4P49221 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TGM4P49221 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TGM4P49221 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.1■□□□□ 0.33
TGM4P49221 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TGM4P49221 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.1■□□□□ 0.33
TGM4P49221 ZNF815P-204ENST00000434898 1737 ntBASIC17.1■□□□□ 0.33
TGM4P49221 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.1■□□□□ 0.33
TGM4P49221 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGM4P49221 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 AF201337.1-201ENST00000520239 748 ntBASIC17.09■□□□□ 0.33
TGM4P49221 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 AC010980.2-201ENST00000587099 1412 ntBASIC17.09■□□□□ 0.33
TGM4P49221 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 TFP1-202ENST00000475455 1573 ntBASIC17.09■□□□□ 0.33
TGM4P49221 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TGM4P49221 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TGM4P49221 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TGM4P49221 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGM4P49221 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.08■□□□□ 0.33
TGM4P49221 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TGM4P49221 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.08■□□□□ 0.33
TGM4P49221 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TGM4P49221 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.08■□□□□ 0.33
TGM4P49221 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGM4P49221 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGM4P49221 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.08■□□□□ 0.32
TGM4P49221 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.08■□□□□ 0.32
TGM4P49221 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.08■□□□□ 0.32
TGM4P49221 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.08■□□□□ 0.32
TGM4P49221 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGM4P49221 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGM4P49221 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.08■□□□□ 0.32
TGM4P49221 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.08■□□□□ 0.32
TGM4P49221 AC083906.2-201ENST00000511578 360 ntBASIC17.08■□□□□ 0.32
TGM4P49221 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.08■□□□□ 0.32
TGM4P49221 AL121832.2-201ENST00000610979 668 ntBASIC17.08■□□□□ 0.32
TGM4P49221 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGM4P49221 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TGM4P49221 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.08■□□□□ 0.32
TGM4P49221 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.08■□□□□ 0.32
TGM4P49221 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TGM4P49221 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGM4P49221 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.08■□□□□ 0.32
TGM4P49221 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
TGM4P49221 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TGM4P49221 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.07■□□□□ 0.32
TGM4P49221 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGM4P49221 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TGM4P49221 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
TGM4P49221 AC093525.10-201ENST00000625130 1569 ntBASIC17.07■□□□□ 0.32
TGM4P49221 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TGM4P49221 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.07■□□□□ 0.32
TGM4P49221 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGM4P49221 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGM4P49221 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TGM4P49221 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.07■□□□□ 0.32
TGM4P49221 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TGM4P49221 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms