Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
CSNK1DP48730 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1DP48730 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1DP48730 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1DP48730 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1DP48730 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1DP48730 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1DP48730 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1DP48730 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1DP48730 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.14■□□□□ 0.65
CSNK1DP48730 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.14■□□□□ 0.65
CSNK1DP48730 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.14■□□□□ 0.65
CSNK1DP48730 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.14■□□□□ 0.65
CSNK1DP48730 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.14■□□□□ 0.65
CSNK1DP48730 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 FAM87A-204ENST00000613235 858 ntBASIC19.14■□□□□ 0.65
CSNK1DP48730 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CSNK1DP48730 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.14■□□□□ 0.65
CSNK1DP48730 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1DP48730 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1DP48730 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.13■□□□□ 0.65
CSNK1DP48730 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.13■□□□□ 0.65
CSNK1DP48730 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.13■□□□□ 0.65
CSNK1DP48730 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.13■□□□□ 0.65
CSNK1DP48730 HMGA1P5-201ENST00000412453 271 ntBASIC19.13■□□□□ 0.65
CSNK1DP48730 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.13■□□□□ 0.65
CSNK1DP48730 ECEL1P2-202ENST00000465689 757 ntBASIC19.13■□□□□ 0.65
CSNK1DP48730 AP003041.3-201ENST00000527151 707 ntBASIC19.13■□□□□ 0.65
CSNK1DP48730 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CSNK1DP48730 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.13■□□□□ 0.65
CSNK1DP48730 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSNK1DP48730 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CSNK1DP48730 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.13■□□□□ 0.65
CSNK1DP48730 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1DP48730 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSNK1DP48730 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1DP48730 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.12■□□□□ 0.65
CSNK1DP48730 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CSNK1DP48730 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSNK1DP48730 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
CSNK1DP48730 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1DP48730 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
CSNK1DP48730 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1DP48730 AC008622.2-201ENST00000617006 1229 ntBASIC19.12■□□□□ 0.65
CSNK1DP48730 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1DP48730 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1DP48730 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1DP48730 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1DP48730 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1DP48730 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.11■□□□□ 0.65
CSNK1DP48730 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CSNK1DP48730 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.11■□□□□ 0.65
CSNK1DP48730 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CSNK1DP48730 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1DP48730 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1DP48730 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1DP48730 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 SLC25A3P1-201ENST00000443844 931 ntBASIC19.11■□□□□ 0.65
CSNK1DP48730 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
CSNK1DP48730 AC005363.2-201ENST00000618631 242 ntBASIC19.11■□□□□ 0.65
CSNK1DP48730 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1DP48730 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms