Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A6P48664 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A6P48664 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A6P48664 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A6P48664 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC1A6P48664 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SLC1A6P48664 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC1A6P48664 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A6P48664 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC1A6P48664 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A6P48664 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A6P48664 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A6P48664 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC1A6P48664 RPS2P52-201ENST00000469610 820 ntBASIC18.76■□□□□ 0.59
SLC1A6P48664 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A6P48664 AC006557.6-201ENST00000623071 864 ntBASIC18.76■□□□□ 0.59
SLC1A6P48664 AC083906.6-201ENST00000641366 219 ntBASIC18.76■□□□□ 0.59
SLC1A6P48664 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC1A6P48664 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC1A6P48664 AC068880.1-201ENST00000507289 2297 ntBASIC18.76■□□□□ 0.59
SLC1A6P48664 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A6P48664 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 HCG11-201ENST00000411553 5696 ntBASIC18.76■□□□□ 0.59
SLC1A6P48664 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A6P48664 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 MKRN4P-201ENST00000444706 1521 ntBASIC18.75■□□□□ 0.59
SLC1A6P48664 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SLC1A6P48664 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC1A6P48664 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC1A6P48664 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC1A6P48664 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.75■□□□□ 0.59
SLC1A6P48664 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC1A6P48664 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC1A6P48664 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
SLC1A6P48664 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC1A6P48664 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A6P48664 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC1A6P48664 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A6P48664 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC1A6P48664 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A6P48664 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC1A6P48664 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 BX276092.2-201ENST00000417668 665 ntBASIC18.74■□□□□ 0.59
SLC1A6P48664 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC1A6P48664 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC1A6P48664 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC1A6P48664 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A6P48664 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC1A6P48664 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC1A6P48664 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A6P48664 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC1A6P48664 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC1A6P48664 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A6P48664 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A6P48664 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms