Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ABHD17AP1-201ENST00000358206 933 ntBASIC17.54■□□□□ 0.4
SLC1A3P43003 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 TSPY20P-201ENST00000450910 630 ntBASIC17.54■□□□□ 0.4
SLC1A3P43003 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A3P43003 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SLC1A3P43003 C1QBPP2-201ENST00000528754 825 ntBASIC17.54■□□□□ 0.4
SLC1A3P43003 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC1A3P43003 HLA-A-209ENST00000638375 975 ntBASIC17.54■□□□□ 0.4
SLC1A3P43003 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SLC1A3P43003 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A3P43003 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A3P43003 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC1A3P43003 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A3P43003 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC1A3P43003 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A3P43003 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
SLC1A3P43003 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC1A3P43003 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A3P43003 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC1A3P43003 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC1A3P43003 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SLC1A3P43003 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 ITM2C-210ENST00000620962 501 ntBASIC17.53■□□□□ 0.4
SLC1A3P43003 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC1A3P43003 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC1A3P43003 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC1A3P43003 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC1A3P43003 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A3P43003 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A3P43003 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC1A3P43003 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC1A3P43003 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC1A3P43003 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC1A3P43003 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC1A3P43003 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 KRT18P29-201ENST00000397031 1267 ntBASIC17.52■□□□□ 0.4
SLC1A3P43003 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC1A3P43003 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 RPPH1-201ENST00000516869 333 ntBASIC17.52■□□□□ 0.4
SLC1A3P43003 AL160286.2-201ENST00000567150 934 ntBASIC17.52■□□□□ 0.4
SLC1A3P43003 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC1A3P43003 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A3P43003 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC1A3P43003 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.52■□□□□ 0.39
SLC1A3P43003 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SLC1A3P43003 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC1A3P43003 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SLC1A3P43003 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC1A3P43003 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SLC1A3P43003 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SLC1A3P43003 AC026471.1-201ENST00000564629 3026 ntBASIC17.52■□□□□ 0.39
SLC1A3P43003 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC1A3P43003 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC1A3P43003 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC1A3P43003 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
SLC1A3P43003 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A3P43003 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC1A3P43003 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC1A3P43003 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC1A3P43003 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC1A3P43003 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A3P43003 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms