Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF9P41273 AC092338.2-201ENST00000568827 1415 ntBASIC20.66■□□□□ 0.9
TNFSF9P41273 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF9P41273 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
TNFSF9P41273 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF9P41273 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TNFSF9P41273 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF9P41273 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF9P41273 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TNFSF9P41273 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.65■□□□□ 0.9
TNFSF9P41273 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.65■□□□□ 0.9
TNFSF9P41273 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.65■□□□□ 0.9
TNFSF9P41273 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF9P41273 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF9P41273 CA15P1-201ENST00000481698 905 ntBASIC20.65■□□□□ 0.9
TNFSF9P41273 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.65■□□□□ 0.9
TNFSF9P41273 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF9P41273 AC116562.4-202ENST00000641738 218 ntBASIC20.65■□□□□ 0.9
TNFSF9P41273 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.65■□□□□ 0.9
TNFSF9P41273 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF9P41273 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.64■□□□□ 0.9
TNFSF9P41273 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF9P41273 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF9P41273 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF9P41273 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF9P41273 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF9P41273 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF9P41273 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF9P41273 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF9P41273 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF9P41273 RCN1P1-201ENST00000400413 996 ntBASIC20.64■□□□□ 0.89
TNFSF9P41273 SLC25A3P1-201ENST00000443844 931 ntBASIC20.64■□□□□ 0.89
TNFSF9P41273 CCR12P-201ENST00000446203 998 ntBASIC20.64■□□□□ 0.89
TNFSF9P41273 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF9P41273 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TNFSF9P41273 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TNFSF9P41273 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TNFSF9P41273 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.64■□□□□ 0.89
TNFSF9P41273 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.64■□□□□ 0.89
TNFSF9P41273 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNFSF9P41273 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF9P41273 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF9P41273 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF9P41273 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF9P41273 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.63■□□□□ 0.89
TNFSF9P41273 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.63■□□□□ 0.89
TNFSF9P41273 AP003041.3-201ENST00000527151 707 ntBASIC20.63■□□□□ 0.89
TNFSF9P41273 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNFSF9P41273 AL353719.1-201ENST00000566847 864 ntBASIC20.63■□□□□ 0.89
TNFSF9P41273 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 AC008622.2-201ENST00000617006 1229 ntBASIC20.63■□□□□ 0.89
TNFSF9P41273 FEM1AP3-201ENST00000403722 1741 ntBASIC20.63■□□□□ 0.89
TNFSF9P41273 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.63■□□□□ 0.89
TNFSF9P41273 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF9P41273 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF9P41273 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFSF9P41273 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 AL049812.1-201ENST00000432563 2267 ntBASIC20.62■□□□□ 0.89
TNFSF9P41273 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFSF9P41273 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF9P41273 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TNFSF9P41273 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF9P41273 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TNFSF9P41273 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.62■□□□□ 0.89
TNFSF9P41273 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 AC005521.1-201ENST00000393351 872 ntBASIC20.62■□□□□ 0.89
TNFSF9P41273 AC128688.1-201ENST00000487626 519 ntBASIC20.62■□□□□ 0.89
TNFSF9P41273 KRT18P21-201ENST00000515767 1272 ntBASIC20.62■□□□□ 0.89
TNFSF9P41273 AC010203.1-204ENST00000548782 407 ntBASIC20.62■□□□□ 0.89
TNFSF9P41273 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.62■□□□□ 0.89
TNFSF9P41273 AC005363.2-201ENST00000618631 242 ntBASIC20.62■□□□□ 0.89
TNFSF9P41273 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFSF9P41273 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFSF9P41273 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TNFSF9P41273 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF9P41273 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF9P41273 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TNFSF9P41273 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms