Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.3■□□□□ 0.68
HADHAP40939 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.3■□□□□ 0.68
HADHAP40939 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.3■□□□□ 0.68
HADHAP40939 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.3■□□□□ 0.68
HADHAP40939 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.29■□□□□ 0.68
HADHAP40939 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.29■□□□□ 0.68
HADHAP40939 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 HTR7P1-201ENST00000538670 1336 ntBASIC19.29■□□□□ 0.68
HADHAP40939 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.29■□□□□ 0.68
HADHAP40939 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 RARRES2P10-201ENST00000564312 460 ntBASIC19.29■□□□□ 0.68
HADHAP40939 AL160286.2-201ENST00000567150 934 ntBASIC19.29■□□□□ 0.68
HADHAP40939 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.29■□□□□ 0.68
HADHAP40939 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.29■□□□□ 0.68
HADHAP40939 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HADHAP40939 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HADHAP40939 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HADHAP40939 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
HADHAP40939 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.28■□□□□ 0.68
HADHAP40939 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
HADHAP40939 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HADHAP40939 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HADHAP40939 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HADHAP40939 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.28■□□□□ 0.68
HADHAP40939 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.28■□□□□ 0.68
HADHAP40939 NIFKP9-201ENST00000419265 221 ntBASIC19.28■□□□□ 0.68
HADHAP40939 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HADHAP40939 AP002982.1-201ENST00000492365 877 ntBASIC19.28■□□□□ 0.68
HADHAP40939 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HADHAP40939 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.28■□□□□ 0.68
HADHAP40939 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.28■□□□□ 0.68
HADHAP40939 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.28■□□□□ 0.68
HADHAP40939 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.28■□□□□ 0.68
HADHAP40939 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HADHAP40939 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HADHAP40939 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 CROCCP3-202ENST00000420820 1947 ntBASIC19.27■□□□□ 0.68
HADHAP40939 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HADHAP40939 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.27■□□□□ 0.68
HADHAP40939 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.27■□□□□ 0.68
HADHAP40939 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.27■□□□□ 0.68
HADHAP40939 GCSHP5-201ENST00000443090 522 ntBASIC19.27■□□□□ 0.68
HADHAP40939 UBE2SP1-201ENST00000450587 669 ntBASIC19.27■□□□□ 0.68
HADHAP40939 AC098590.1-201ENST00000468126 897 ntBASIC19.27■□□□□ 0.68
HADHAP40939 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.27■□□□□ 0.68
HADHAP40939 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.27■□□□□ 0.68
HADHAP40939 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.27■□□□□ 0.68
HADHAP40939 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.27■□□□□ 0.68
HADHAP40939 AL445675.2-201ENST00000620291 557 ntBASIC19.27■□□□□ 0.68
HADHAP40939 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
HADHAP40939 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HADHAP40939 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.27■□□□□ 0.68
HADHAP40939 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HADHAP40939 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HADHAP40939 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms