Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFC3P40938 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC3P40938 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 SLC25A1P2-201ENST00000430693 912 ntBASIC17.45■□□□□ 0.38
RFC3P40938 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFC3P40938 AC007663.1-201ENST00000438948 1240 ntBASIC17.45■□□□□ 0.38
RFC3P40938 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.45■□□□□ 0.38
RFC3P40938 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC3P40938 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC3P40938 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC3P40938 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFC3P40938 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.44■□□□□ 0.38
RFC3P40938 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC3P40938 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC3P40938 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 AC104417.2-201ENST00000562989 1793 ntBASIC17.44■□□□□ 0.38
RFC3P40938 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFC3P40938 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 HMGA1P5-201ENST00000412453 271 ntBASIC17.44■□□□□ 0.38
RFC3P40938 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC3P40938 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.44■□□□□ 0.38
RFC3P40938 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.44■□□□□ 0.38
RFC3P40938 CKBP1-201ENST00000565489 1086 ntBASIC17.44■□□□□ 0.38
RFC3P40938 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.44■□□□□ 0.38
RFC3P40938 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC3P40938 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RFC3P40938 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC3P40938 KRT8P11-201ENST00000409686 1436 ntBASIC17.44■□□□□ 0.38
RFC3P40938 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RFC3P40938 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC3P40938 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC3P40938 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 LETM1P2-201ENST00000597330 2178 ntBASIC17.43■□□□□ 0.38
RFC3P40938 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC3P40938 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.43■□□□□ 0.38
RFC3P40938 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.43■□□□□ 0.38
RFC3P40938 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.43■□□□□ 0.38
RFC3P40938 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
RFC3P40938 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RFC3P40938 WWOX-216ENST00000569818 525 ntBASIC17.43■□□□□ 0.38
RFC3P40938 NTF6B-201ENST00000591913 560 ntBASIC17.43■□□□□ 0.38
RFC3P40938 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 ZNF815P-204ENST00000434898 1737 ntBASIC17.43■□□□□ 0.38
RFC3P40938 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC3P40938 SDHAP1-207ENST00000440850 2000 ntBASIC17.43■□□□□ 0.38
RFC3P40938 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RFC3P40938 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC3P40938 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RFC3P40938 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC3P40938 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.42■□□□□ 0.38
RFC3P40938 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RFC3P40938 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 AC092338.2-201ENST00000568827 1415 ntBASIC17.42■□□□□ 0.38
RFC3P40938 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms