Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDE6BP35913 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PDE6BP35913 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PDE6BP35913 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE6BP35913 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 LINC00265-3P-201ENST00000447588 903 ntBASIC23.52■■□□□ 1.36
PDE6BP35913 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE6BP35913 MIR3917-201ENST00000580971 93 ntBASIC23.52■■□□□ 1.36
PDE6BP35913 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.52■■□□□ 1.36
PDE6BP35913 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.52■■□□□ 1.36
PDE6BP35913 AC023511.2-201ENST00000618803 211 ntBASIC23.52■■□□□ 1.36
PDE6BP35913 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE6BP35913 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE6BP35913 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE6BP35913 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE6BP35913 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDE6BP35913 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.51■■□□□ 1.35
PDE6BP35913 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDE6BP35913 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 AL022342.1-201ENST00000400363 863 ntBASIC23.51■■□□□ 1.35
PDE6BP35913 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.51■■□□□ 1.35
PDE6BP35913 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.51■■□□□ 1.35
PDE6BP35913 AC012615.1-201ENST00000565797 1299 ntBASIC23.51■■□□□ 1.35
PDE6BP35913 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.51■■□□□ 1.35
PDE6BP35913 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDE6BP35913 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDE6BP35913 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PDE6BP35913 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE6BP35913 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.51■■□□□ 1.35
PDE6BP35913 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.5■■□□□ 1.35
PDE6BP35913 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE6BP35913 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.5■■□□□ 1.35
PDE6BP35913 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE6BP35913 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.5■■□□□ 1.35
PDE6BP35913 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE6BP35913 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDE6BP35913 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE6BP35913 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
PDE6BP35913 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
PDE6BP35913 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.5■■□□□ 1.35
PDE6BP35913 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.5■■□□□ 1.35
PDE6BP35913 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.5■■□□□ 1.35
PDE6BP35913 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.5■■□□□ 1.35
PDE6BP35913 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.5■■□□□ 1.35
PDE6BP35913 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PDE6BP35913 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDE6BP35913 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE6BP35913 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.5■■□□□ 1.35
PDE6BP35913 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PDE6BP35913 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.49■■□□□ 1.35
PDE6BP35913 AC079781.3-201ENST00000449110 356 ntBASIC23.49■■□□□ 1.35
PDE6BP35913 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.49■■□□□ 1.35
PDE6BP35913 FOSL1P1-201ENST00000511041 816 ntBASIC23.49■■□□□ 1.35
PDE6BP35913 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 AC006538.3-201ENST00000612495 578 ntBASIC23.49■■□□□ 1.35
PDE6BP35913 AC004263.2-201ENST00000617183 678 ntBASIC23.49■■□□□ 1.35
PDE6BP35913 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
PDE6BP35913 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PDE6BP35913 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PDE6BP35913 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PDE6BP35913 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.49■■□□□ 1.35
PDE6BP35913 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDE6BP35913 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PDE6BP35913 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PDE6BP35913 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PDE6BP35913 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.48■■□□□ 1.35
PDE6BP35913 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDE6BP35913 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PDE6BP35913 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.48■■□□□ 1.35
PDE6BP35913 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms