Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CHKAP35790 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.13■□□□□ 0.81
CHKAP35790 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 ECEL1P3-201ENST00000427961 737 ntBASIC20.13■□□□□ 0.81
CHKAP35790 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.13■□□□□ 0.81
CHKAP35790 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CHKAP35790 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CHKAP35790 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.12■□□□□ 0.81
CHKAP35790 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.12■□□□□ 0.81
CHKAP35790 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.12■□□□□ 0.81
CHKAP35790 AC133561.5-201ENST00000635547 218 ntBASIC20.12■□□□□ 0.81
CHKAP35790 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CHKAP35790 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHKAP35790 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.11■□□□□ 0.81
CHKAP35790 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CHKAP35790 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.11■□□□□ 0.81
CHKAP35790 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CHKAP35790 AC004980.1-204ENST00000429707 299 ntBASIC20.11■□□□□ 0.81
CHKAP35790 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.11■□□□□ 0.81
CHKAP35790 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.11■□□□□ 0.81
CHKAP35790 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.11■□□□□ 0.81
CHKAP35790 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.11■□□□□ 0.81
CHKAP35790 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHKAP35790 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.1■□□□□ 0.81
CHKAP35790 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CHKAP35790 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CHKAP35790 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.1■□□□□ 0.81
CHKAP35790 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.1■□□□□ 0.81
CHKAP35790 MIR6786-201ENST00000616843 113 ntBASIC20.1■□□□□ 0.81
CHKAP35790 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.1■□□□□ 0.81
CHKAP35790 HLA-A-209ENST00000638375 975 ntBASIC20.1■□□□□ 0.81
CHKAP35790 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHKAP35790 AC079598.2-202ENST00000546624 1451 ntBASIC20.1■□□□□ 0.81
CHKAP35790 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHKAP35790 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.1■□□□□ 0.81
CHKAP35790 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHKAP35790 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.09■□□□□ 0.81
CHKAP35790 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms