Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.28■□□□□ 0.68
RPA3P35244 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.28■□□□□ 0.68
RPA3P35244 UNC93B5-201ENST00000530315 699 ntBASIC19.28■□□□□ 0.68
RPA3P35244 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.28■□□□□ 0.68
RPA3P35244 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RPA3P35244 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.28■□□□□ 0.68
RPA3P35244 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.28■□□□□ 0.68
RPA3P35244 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.28■□□□□ 0.68
RPA3P35244 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPA3P35244 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.27■□□□□ 0.68
RPA3P35244 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RPA3P35244 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.27■□□□□ 0.68
RPA3P35244 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
RPA3P35244 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RPA3P35244 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RPA3P35244 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RPA3P35244 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.27■□□□□ 0.68
RPA3P35244 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.27■□□□□ 0.68
RPA3P35244 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.27■□□□□ 0.68
RPA3P35244 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPA3P35244 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
RPA3P35244 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RPA3P35244 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPA3P35244 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.27■□□□□ 0.67
RPA3P35244 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPA3P35244 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RPA3P35244 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPA3P35244 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.26■□□□□ 0.67
RPA3P35244 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RPA3P35244 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPA3P35244 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPA3P35244 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.26■□□□□ 0.67
RPA3P35244 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.26■□□□□ 0.67
RPA3P35244 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.26■□□□□ 0.67
RPA3P35244 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPA3P35244 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.26■□□□□ 0.67
RPA3P35244 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.26■□□□□ 0.67
RPA3P35244 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPA3P35244 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.26■□□□□ 0.67
RPA3P35244 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.26■□□□□ 0.67
RPA3P35244 TFP1-202ENST00000475455 1573 ntBASIC19.26■□□□□ 0.67
RPA3P35244 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPA3P35244 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.26■□□□□ 0.67
RPA3P35244 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RPA3P35244 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RPA3P35244 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPA3P35244 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPA3P35244 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
RPA3P35244 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 SDHAP1-207ENST00000440850 2000 ntBASIC19.25■□□□□ 0.67
RPA3P35244 NOC2LP1-202ENST00000452600 2235 ntBASIC19.25■□□□□ 0.67
RPA3P35244 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPA3P35244 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.25■□□□□ 0.67
RPA3P35244 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPA3P35244 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.25■□□□□ 0.67
RPA3P35244 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.25■□□□□ 0.67
RPA3P35244 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
RPA3P35244 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.25■□□□□ 0.67
RPA3P35244 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.25■□□□□ 0.67
RPA3P35244 UNC93B4-201ENST00000505679 747 ntBASIC19.25■□□□□ 0.67
RPA3P35244 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPA3P35244 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
RPA3P35244 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.25■□□□□ 0.67
RPA3P35244 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPA3P35244 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPA3P35244 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPA3P35244 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPA3P35244 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms