Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 AL032819.2-201ENST00000624543 2162 ntBASIC17.48■□□□□ 0.39
SHC1P29353 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 NIFKP9-201ENST00000419265 221 ntBASIC17.48■□□□□ 0.39
SHC1P29353 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.48■□□□□ 0.39
SHC1P29353 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 AP002982.1-201ENST00000492365 877 ntBASIC17.48■□□□□ 0.39
SHC1P29353 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SHC1P29353 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.48■□□□□ 0.39
SHC1P29353 AC233702.5-201ENST00000584107 538 ntBASIC17.48■□□□□ 0.39
SHC1P29353 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 AC113410.3-201ENST00000623366 203 ntBASIC17.48■□□□□ 0.39
SHC1P29353 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.48■□□□□ 0.39
SHC1P29353 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
SHC1P29353 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.48■□□□□ 0.39
SHC1P29353 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC1P29353 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SHC1P29353 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC1P29353 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SHC1P29353 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHC1P29353 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 AC012618.2-201ENST00000428058 849 ntBASIC17.47■□□□□ 0.39
SHC1P29353 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.47■□□□□ 0.39
SHC1P29353 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.47■□□□□ 0.39
SHC1P29353 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.47■□□□□ 0.39
SHC1P29353 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.47■□□□□ 0.39
SHC1P29353 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.47■□□□□ 0.39
SHC1P29353 AP006294.2-201ENST00000641667 209 ntBASIC17.47■□□□□ 0.39
SHC1P29353 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC1P29353 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC1P29353 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.47■□□□□ 0.39
SHC1P29353 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.47■□□□□ 0.39
SHC1P29353 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.47■□□□□ 0.39
SHC1P29353 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHC1P29353 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SHC1P29353 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHC1P29353 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHC1P29353 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 FAM197Y1-201ENST00000421178 764 ntBASIC17.46■□□□□ 0.39
SHC1P29353 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC1P29353 AL353708.3-201ENST00000610272 989 ntBASIC17.46■□□□□ 0.39
SHC1P29353 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC1P29353 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.46■□□□□ 0.39
SHC1P29353 AL049637.2-201ENST00000641778 930 ntBASIC17.46■□□□□ 0.39
SHC1P29353 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.46■□□□□ 0.39
SHC1P29353 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHC1P29353 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.46■□□□□ 0.39
SHC1P29353 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHC1P29353 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SHC1P29353 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SHC1P29353 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.45■□□□□ 0.38
SHC1P29353 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.45■□□□□ 0.38
SHC1P29353 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms