Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 DUX4L26-201ENST00000489078 1255 ntBASIC16.46■□□□□ 0.23
CD40P25942 AC006011.2-201ENST00000621313 1158 ntBASIC16.46■□□□□ 0.23
CD40P25942 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CD40P25942 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.46■□□□□ 0.23
CD40P25942 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.46■□□□□ 0.23
CD40P25942 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.46■□□□□ 0.23
CD40P25942 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CD40P25942 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.46■□□□□ 0.22
CD40P25942 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.45■□□□□ 0.22
CD40P25942 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.45■□□□□ 0.22
CD40P25942 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.45■□□□□ 0.22
CD40P25942 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD40P25942 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD40P25942 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.45■□□□□ 0.22
CD40P25942 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CD40P25942 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.45■□□□□ 0.22
CD40P25942 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.45■□□□□ 0.22
CD40P25942 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD40P25942 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CD40P25942 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CD40P25942 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.44■□□□□ 0.22
CD40P25942 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 AL445228.2-201ENST00000605589 952 ntBASIC16.44■□□□□ 0.22
CD40P25942 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.44■□□□□ 0.22
CD40P25942 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CD40P25942 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD40P25942 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.44■□□□□ 0.22
CD40P25942 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD40P25942 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD40P25942 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CD40P25942 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.43■□□□□ 0.22
CD40P25942 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.43■□□□□ 0.22
CD40P25942 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD40P25942 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CD40P25942 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.43■□□□□ 0.22
CD40P25942 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CD40P25942 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.43■□□□□ 0.22
CD40P25942 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD40P25942 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD40P25942 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD40P25942 AK4P3-201ENST00000418260 669 ntBASIC16.43■□□□□ 0.22
CD40P25942 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.43■□□□□ 0.22
CD40P25942 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.43■□□□□ 0.22
CD40P25942 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CD40P25942 KRT18P35-201ENST00000510488 1269 ntBASIC16.43■□□□□ 0.22
CD40P25942 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.43■□□□□ 0.22
CD40P25942 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CD40P25942 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD40P25942 AC141257.4-201ENST00000634557 245 ntBASIC16.43■□□□□ 0.22
CD40P25942 AC136944.6-201ENST00000634818 245 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms