Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HOXB3P14651 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXB3P14651 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXB3P14651 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 KRT8P45-201ENST00000414328 1447 ntBASIC18.68■□□□□ 0.58
HOXB3P14651 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXB3P14651 Z85996.1-201ENST00000494644 937 ntBASIC18.68■□□□□ 0.58
HOXB3P14651 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXB3P14651 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
HOXB3P14651 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXB3P14651 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HOXB3P14651 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXB3P14651 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXB3P14651 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXB3P14651 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXB3P14651 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXB3P14651 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXB3P14651 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXB3P14651 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXB3P14651 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HOXB3P14651 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXB3P14651 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HOXB3P14651 FAM207BP-201ENST00000447172 505 ntBASIC18.67■□□□□ 0.58
HOXB3P14651 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXB3P14651 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.67■□□□□ 0.58
HOXB3P14651 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXB3P14651 AC139887.4-201ENST00000607877 719 ntBASIC18.67■□□□□ 0.58
HOXB3P14651 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXB3P14651 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXB3P14651 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HOXB3P14651 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXB3P14651 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXB3P14651 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXB3P14651 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 MFAP1P1-201ENST00000442257 1255 ntBASIC18.66■□□□□ 0.58
HOXB3P14651 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXB3P14651 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXB3P14651 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 AC022898.2-201ENST00000616822 1312 ntBASIC18.66■□□□□ 0.58
HOXB3P14651 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXB3P14651 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXB3P14651 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXB3P14651 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXB3P14651 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HOXB3P14651 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HOXB3P14651 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXB3P14651 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXB3P14651 HMGN1P19-201ENST00000436976 333 ntBASIC18.65■□□□□ 0.58
HOXB3P14651 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXB3P14651 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXB3P14651 FAM87A-204ENST00000613235 858 ntBASIC18.65■□□□□ 0.58
HOXB3P14651 AL121956.5-201ENST00000625261 221 ntBASIC18.65■□□□□ 0.58
HOXB3P14651 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXB3P14651 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms