Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 AL162377.1-201ENST00000618844 1793 ntBASIC23.38■■□□□ 1.33
COL11A2P13942 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL11A2P13942 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.37■■□□□ 1.33
COL11A2P13942 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL11A2P13942 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.37■■□□□ 1.33
COL11A2P13942 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.37■■□□□ 1.33
COL11A2P13942 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.37■■□□□ 1.33
COL11A2P13942 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.37■■□□□ 1.33
COL11A2P13942 GPALPP1-207ENST00000611650 899 ntBASIC23.37■■□□□ 1.33
COL11A2P13942 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL11A2P13942 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL11A2P13942 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL11A2P13942 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL11A2P13942 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL11A2P13942 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.36■■□□□ 1.33
COL11A2P13942 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.36■■□□□ 1.33
COL11A2P13942 AC104819.1-201ENST00000504587 486 ntBASIC23.36■■□□□ 1.33
COL11A2P13942 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.36■■□□□ 1.33
COL11A2P13942 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.36■■□□□ 1.33
COL11A2P13942 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
COL11A2P13942 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL11A2P13942 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.36■■□□□ 1.33
COL11A2P13942 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL11A2P13942 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL11A2P13942 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL11A2P13942 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.36■■□□□ 1.33
COL11A2P13942 HLA-A-201ENST00000376802 1334 ntBASIC23.36■■□□□ 1.33
COL11A2P13942 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL11A2P13942 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.36■■□□□ 1.33
COL11A2P13942 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.36■■□□□ 1.33
COL11A2P13942 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.36■■□□□ 1.33
COL11A2P13942 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.36■■□□□ 1.33
COL11A2P13942 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.35■■□□□ 1.33
COL11A2P13942 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 AC233702.3-201ENST00000578656 1387 ntBASIC23.35■■□□□ 1.33
COL11A2P13942 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
COL11A2P13942 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.35■■□□□ 1.33
COL11A2P13942 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.35■■□□□ 1.33
COL11A2P13942 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
COL11A2P13942 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL11A2P13942 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
COL11A2P13942 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 RNA5SP419-201ENST00000515908 135 ntBASIC23.34■■□□□ 1.33
COL11A2P13942 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.34■■□□□ 1.33
COL11A2P13942 AL390719.2-201ENST00000606993 987 ntBASIC23.34■■□□□ 1.33
COL11A2P13942 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.34■■□□□ 1.33
COL11A2P13942 AL391422.3-201ENST00000603791 2761 ntBASIC23.34■■□□□ 1.33
COL11A2P13942 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
COL11A2P13942 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL11A2P13942 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.33■■□□□ 1.33
COL11A2P13942 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.33■■□□□ 1.33
COL11A2P13942 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A2P13942 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
COL11A2P13942 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
COL11A2P13942 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.33■■□□□ 1.33
COL11A2P13942 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
COL11A2P13942 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.33■■□□□ 1.33
COL11A2P13942 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A2P13942 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.33■■□□□ 1.33
COL11A2P13942 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.33■■□□□ 1.33
COL11A2P13942 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A2P13942 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL11A2P13942 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A2P13942 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.33■■□□□ 1.32
COL11A2P13942 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A2P13942 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A2P13942 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A2P13942 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.33■■□□□ 1.32
COL11A2P13942 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
COL11A2P13942 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL11A2P13942 Z83836.1-201ENST00000624605 1642 ntBASIC23.32■■□□□ 1.32
COL11A2P13942 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
COL11A2P13942 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
COL11A2P13942 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms