Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.04■□□□□ 0.8
RARAP10276 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RARAP10276 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RARAP10276 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.03■□□□□ 0.8
RARAP10276 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RARAP10276 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.03■□□□□ 0.8
RARAP10276 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.03■□□□□ 0.8
RARAP10276 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RARAP10276 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.03■□□□□ 0.8
RARAP10276 KRT16P5-201ENST00000455284 522 ntBASIC20.03■□□□□ 0.8
RARAP10276 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.03■□□□□ 0.8
RARAP10276 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.03■□□□□ 0.8
RARAP10276 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RARAP10276 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.03■□□□□ 0.8
RARAP10276 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RARAP10276 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.02■□□□□ 0.8
RARAP10276 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 AC009113.1-201ENST00000570267 2443 ntBASIC20.02■□□□□ 0.8
RARAP10276 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.02■□□□□ 0.8
RARAP10276 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.02■□□□□ 0.8
RARAP10276 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.02■□□□□ 0.8
RARAP10276 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 AC110285.5-201ENST00000611501 352 ntBASIC20.02■□□□□ 0.8
RARAP10276 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.02■□□□□ 0.8
RARAP10276 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RARAP10276 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RARAP10276 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.02■□□□□ 0.8
RARAP10276 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RARAP10276 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RARAP10276 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.02■□□□□ 0.79
RARAP10276 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
RARAP10276 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
RARAP10276 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.01■□□□□ 0.79
RARAP10276 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARAP10276 AL031598.1-201ENST00000561511 1773 ntBASIC20.01■□□□□ 0.79
RARAP10276 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RARAP10276 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARAP10276 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.01■□□□□ 0.79
RARAP10276 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RARAP10276 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.01■□□□□ 0.79
RARAP10276 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.01■□□□□ 0.79
RARAP10276 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.01■□□□□ 0.79
RARAP10276 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.01■□□□□ 0.79
RARAP10276 IRX1P1-201ENST00000438849 1838 ntBASIC20.01■□□□□ 0.79
RARAP10276 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARAP10276 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RARAP10276 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RARAP10276 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20■□□□□ 0.79
RARAP10276 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RARAP10276 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20■□□□□ 0.79
RARAP10276 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20■□□□□ 0.79
RARAP10276 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20■□□□□ 0.79
RARAP10276 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RARAP10276 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RARAP10276 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RARAP10276 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20■□□□□ 0.79
RARAP10276 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20■□□□□ 0.79
RARAP10276 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20■□□□□ 0.79
RARAP10276 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20■□□□□ 0.79
RARAP10276 AL160286.2-201ENST00000567150 934 ntBASIC20■□□□□ 0.79
RARAP10276 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20■□□□□ 0.79
RARAP10276 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms