Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.39■■□□□ 1.01
TPM3P06753 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.39■■□□□ 1.01
TPM3P06753 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TPM3P06753 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TPM3P06753 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM3P06753 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TPM3P06753 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TPM3P06753 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TPM3P06753 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.38■■□□□ 1.01
TPM3P06753 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TPM3P06753 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.38■■□□□ 1.01
TPM3P06753 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TPM3P06753 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 AC034268.1-201ENST00000441047 882 ntBASIC21.38■■□□□ 1.01
TPM3P06753 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.38■■□□□ 1.01
TPM3P06753 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM3P06753 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
TPM3P06753 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TPM3P06753 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.37■■□□□ 1.01
TPM3P06753 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TPM3P06753 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.37■■□□□ 1.01
TPM3P06753 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TPM3P06753 CNN2P6-201ENST00000439038 900 ntBASIC21.37■■□□□ 1.01
TPM3P06753 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.37■■□□□ 1.01
TPM3P06753 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 ZNF815P-204ENST00000434898 1737 ntBASIC21.37■■□□□ 1.01
TPM3P06753 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.37■■□□□ 1.01
TPM3P06753 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TPM3P06753 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.37■■□□□ 1.01
TPM3P06753 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.37■■□□□ 1.01
TPM3P06753 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.36■■□□□ 1.01
TPM3P06753 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.36■■□□□ 1.01
TPM3P06753 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.36■■□□□ 1.01
TPM3P06753 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.36■■□□□ 1.01
TPM3P06753 AL355472.2-201ENST00000422958 438 ntBASIC21.36■■□□□ 1.01
TPM3P06753 CYP2T1P-201ENST00000432607 1285 ntBASIC21.36■■□□□ 1.01
TPM3P06753 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.36■■□□□ 1.01
TPM3P06753 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.36■■□□□ 1.01
TPM3P06753 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.36■■□□□ 1.01
TPM3P06753 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.36■■□□□ 1.01
TPM3P06753 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TPM3P06753 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TPM3P06753 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TPM3P06753 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.35■■□□□ 1.01
TPM3P06753 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TPM3P06753 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.35■■□□□ 1.01
TPM3P06753 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.35■■□□□ 1.01
TPM3P06753 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TPM3P06753 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.35■■□□□ 1.01
TPM3P06753 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.35■■□□□ 1.01
TPM3P06753 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms