Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN1O95832 AP003041.3-201ENST00000527151 707 ntBASIC17.03■□□□□ 0.32
CLDN1O95832 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN1O95832 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN1O95832 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN1O95832 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN1O95832 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN1O95832 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN1O95832 STARP1-201ENST00000397973 869 ntBASIC17.02■□□□□ 0.32
CLDN1O95832 SPDYE13P-201ENST00000445314 798 ntBASIC17.02■□□□□ 0.32
CLDN1O95832 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN1O95832 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN1O95832 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN1O95832 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN1O95832 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN1O95832 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN1O95832 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLDN1O95832 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.02■□□□□ 0.32
CLDN1O95832 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN1O95832 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN1O95832 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN1O95832 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CLDN1O95832 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN1O95832 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.01■□□□□ 0.31
CLDN1O95832 Z85996.1-201ENST00000494644 937 ntBASIC17.01■□□□□ 0.31
CLDN1O95832 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN1O95832 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN1O95832 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN1O95832 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN1O95832 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN1O95832 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN1O95832 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN1O95832 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN1O95832 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLDN1O95832 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN1O95832 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN1O95832 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN1O95832 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN1O95832 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17■□□□□ 0.31
CLDN1O95832 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17■□□□□ 0.31
CLDN1O95832 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17■□□□□ 0.31
CLDN1O95832 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 CA15P1-201ENST00000481698 905 ntBASIC17■□□□□ 0.31
CLDN1O95832 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17■□□□□ 0.31
CLDN1O95832 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17■□□□□ 0.31
CLDN1O95832 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CLDN1O95832 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 GABARAPL3-202ENST00000624044 1851 ntBASIC17■□□□□ 0.31
CLDN1O95832 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLDN1O95832 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN1O95832 AC018553.1-201ENST00000616682 1458 ntBASIC16.99■□□□□ 0.31
CLDN1O95832 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN1O95832 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CLDN1O95832 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 AP000523.1-201ENST00000398242 1049 ntBASIC16.99■□□□□ 0.31
CLDN1O95832 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.99■□□□□ 0.31
CLDN1O95832 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 GCSHP2-201ENST00000560971 527 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms