Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 AC009113.1-201ENST00000570267 2443 ntBASIC17.24■□□□□ 0.35
PPP1R3DO95685 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPP1R3DO95685 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PPP1R3DO95685 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 AC093525.10-201ENST00000625130 1569 ntBASIC17.23■□□□□ 0.35
PPP1R3DO95685 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 WIZP1-201ENST00000531444 2299 ntBASIC17.23■□□□□ 0.35
PPP1R3DO95685 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 AL512353.2-201ENST00000448759 1962 ntBASIC17.23■□□□□ 0.35
PPP1R3DO95685 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 FEM1AP3-201ENST00000403722 1741 ntBASIC17.23■□□□□ 0.35
PPP1R3DO95685 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPP1R3DO95685 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 Z98044.1-201ENST00000632503 1764 ntBASIC17.23■□□□□ 0.35
PPP1R3DO95685 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.23■□□□□ 0.35
PPP1R3DO95685 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms