Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.95■□□□□ 0.3
CNOT4O95628 AC097488.1-201ENST00000507834 756 ntBASIC16.95■□□□□ 0.3
CNOT4O95628 PRSS44-201ENST00000515154 1146 ntBASIC16.95■□□□□ 0.3
CNOT4O95628 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT4O95628 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CNOT4O95628 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 AL590326.2-201ENST00000625139 305 ntBASIC16.95■□□□□ 0.3
CNOT4O95628 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.95■□□□□ 0.3
CNOT4O95628 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNOT4O95628 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT4O95628 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CNOT4O95628 KRT8P41-201ENST00000533985 1514 ntBASIC16.95■□□□□ 0.3
CNOT4O95628 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT4O95628 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNOT4O95628 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.94■□□□□ 0.3
CNOT4O95628 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CNOT4O95628 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 MIR1238-201ENST00000408483 83 ntBASIC16.94■□□□□ 0.3
CNOT4O95628 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT4O95628 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.94■□□□□ 0.3
CNOT4O95628 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.94■□□□□ 0.3
CNOT4O95628 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.94■□□□□ 0.3
CNOT4O95628 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.94■□□□□ 0.3
CNOT4O95628 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CNOT4O95628 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT4O95628 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.94■□□□□ 0.3
CNOT4O95628 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.94■□□□□ 0.3
CNOT4O95628 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNOT4O95628 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.94■□□□□ 0.3
CNOT4O95628 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CNOT4O95628 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.93■□□□□ 0.3
CNOT4O95628 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
CNOT4O95628 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT4O95628 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT4O95628 TREX1-205ENST00000625293 1783 ntBASIC16.93■□□□□ 0.3
CNOT4O95628 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CNOT4O95628 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.93■□□□□ 0.3
CNOT4O95628 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT4O95628 C2orf69P3-201ENST00000565542 1120 ntBASIC16.93■□□□□ 0.3
CNOT4O95628 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.93■□□□□ 0.3
CNOT4O95628 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.93■□□□□ 0.3
CNOT4O95628 AC092865.7-201ENST00000641832 219 ntBASIC16.93■□□□□ 0.3
CNOT4O95628 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CNOT4O95628 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT4O95628 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CNOT4O95628 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.93■□□□□ 0.3
CNOT4O95628 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNOT4O95628 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.92■□□□□ 0.3
CNOT4O95628 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CNOT4O95628 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.92■□□□□ 0.3
CNOT4O95628 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.92■□□□□ 0.3
CNOT4O95628 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.92■□□□□ 0.3
CNOT4O95628 TSPY21P-201ENST00000433481 731 ntBASIC16.92■□□□□ 0.3
CNOT4O95628 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.92■□□□□ 0.3
CNOT4O95628 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.92■□□□□ 0.3
CNOT4O95628 CA15P1-201ENST00000481698 905 ntBASIC16.92■□□□□ 0.3
CNOT4O95628 NAPSB-206ENST00000562112 1266 ntBASIC16.92■□□□□ 0.3
CNOT4O95628 AC005363.2-201ENST00000618631 242 ntBASIC16.92■□□□□ 0.3
CNOT4O95628 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.92■□□□□ 0.3
CNOT4O95628 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.92■□□□□ 0.3
CNOT4O95628 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.92■□□□□ 0.3
CNOT4O95628 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CNOT4O95628 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.92■□□□□ 0.3
CNOT4O95628 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.92■□□□□ 0.3
CNOT4O95628 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CNOT4O95628 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms