Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLSTN1O94985 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLSTN1O94985 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLSTN1O94985 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLSTN1O94985 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.09■□□□□ 0.97
CLSTN1O94985 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.09■□□□□ 0.97
CLSTN1O94985 TUBB8P6-201ENST00000436895 1288 ntBASIC21.09■□□□□ 0.97
CLSTN1O94985 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.09■□□□□ 0.97
CLSTN1O94985 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.09■□□□□ 0.97
CLSTN1O94985 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLSTN1O94985 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLSTN1O94985 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLSTN1O94985 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLSTN1O94985 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLSTN1O94985 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLSTN1O94985 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLSTN1O94985 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLSTN1O94985 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLSTN1O94985 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.08■□□□□ 0.97
CLSTN1O94985 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.08■□□□□ 0.97
CLSTN1O94985 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.08■□□□□ 0.97
CLSTN1O94985 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.08■□□□□ 0.97
CLSTN1O94985 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.08■□□□□ 0.97
CLSTN1O94985 AC110285.5-201ENST00000611501 352 ntBASIC21.08■□□□□ 0.97
CLSTN1O94985 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CLSTN1O94985 AL359736.2-201ENST00000621992 437 ntBASIC21.08■□□□□ 0.97
CLSTN1O94985 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CLSTN1O94985 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.08■□□□□ 0.96
CLSTN1O94985 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLSTN1O94985 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.08■□□□□ 0.96
CLSTN1O94985 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
CLSTN1O94985 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.07■□□□□ 0.96
CLSTN1O94985 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLSTN1O94985 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.07■□□□□ 0.96
CLSTN1O94985 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.07■□□□□ 0.96
CLSTN1O94985 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CLSTN1O94985 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 AC098590.1-201ENST00000468126 897 ntBASIC21.07■□□□□ 0.96
CLSTN1O94985 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.07■□□□□ 0.96
CLSTN1O94985 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLSTN1O94985 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLSTN1O94985 AC005332.7-201ENST00000614046 2005 ntBASIC21.07■□□□□ 0.96
CLSTN1O94985 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CLSTN1O94985 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.07■□□□□ 0.96
CLSTN1O94985 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLSTN1O94985 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.06■□□□□ 0.96
CLSTN1O94985 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CLSTN1O94985 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
CLSTN1O94985 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLSTN1O94985 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CLSTN1O94985 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.06■□□□□ 0.96
CLSTN1O94985 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.06■□□□□ 0.96
CLSTN1O94985 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.06■□□□□ 0.96
CLSTN1O94985 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.06■□□□□ 0.96
CLSTN1O94985 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.06■□□□□ 0.96
CLSTN1O94985 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLSTN1O94985 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.06■□□□□ 0.96
CLSTN1O94985 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.06■□□□□ 0.96
CLSTN1O94985 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms