Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT3O75175 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT3O75175 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CNOT3O75175 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.49■□□□□ 0.55
CNOT3O75175 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.48■□□□□ 0.55
CNOT3O75175 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.48■□□□□ 0.55
CNOT3O75175 YBX1P10-201ENST00000444752 975 ntBASIC18.48■□□□□ 0.55
CNOT3O75175 KSR1P1-201ENST00000446298 240 ntBASIC18.48■□□□□ 0.55
CNOT3O75175 KRT18P16-201ENST00000510337 1294 ntBASIC18.48■□□□□ 0.55
CNOT3O75175 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.48■□□□□ 0.55
CNOT3O75175 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.48■□□□□ 0.55
CNOT3O75175 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CNOT3O75175 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
CNOT3O75175 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT3O75175 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.48■□□□□ 0.55
CNOT3O75175 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CNOT3O75175 AC020916.1-201ENST00000587762 1774 ntBASIC18.47■□□□□ 0.55
CNOT3O75175 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.47■□□□□ 0.55
CNOT3O75175 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CNOT3O75175 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CNOT3O75175 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CNOT3O75175 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
CNOT3O75175 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.47■□□□□ 0.55
CNOT3O75175 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.47■□□□□ 0.55
CNOT3O75175 RBM17P1-201ENST00000453646 1190 ntBASIC18.47■□□□□ 0.55
CNOT3O75175 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.47■□□□□ 0.55
CNOT3O75175 AC133561.5-201ENST00000635547 218 ntBASIC18.47■□□□□ 0.55
CNOT3O75175 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.47■□□□□ 0.55
CNOT3O75175 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT3O75175 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT3O75175 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CNOT3O75175 AC079598.2-202ENST00000546624 1451 ntBASIC18.46■□□□□ 0.55
CNOT3O75175 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT3O75175 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.46■□□□□ 0.55
CNOT3O75175 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT3O75175 LINC01023-201ENST00000606054 436 ntBASIC18.46■□□□□ 0.55
CNOT3O75175 AC012306.2-201ENST00000609350 630 ntBASIC18.46■□□□□ 0.55
CNOT3O75175 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.46■□□□□ 0.55
CNOT3O75175 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT3O75175 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.46■□□□□ 0.55
CNOT3O75175 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT3O75175 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.46■□□□□ 0.54
CNOT3O75175 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms