Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
BRD4O60885 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
BRD4O60885 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
BRD4O60885 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC26.41■■□□□ 1.82
BRD4O60885 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
BRD4O60885 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
BRD4O60885 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
BRD4O60885 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.4■■□□□ 1.82
BRD4O60885 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.4■■□□□ 1.82
BRD4O60885 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
BRD4O60885 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
BRD4O60885 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC26.4■■□□□ 1.82
BRD4O60885 PHB2-202ENST00000440277 996 ntTSL 5 BASIC26.4■■□□□ 1.82
BRD4O60885 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC26.4■■□□□ 1.82
BRD4O60885 NMU-205ENST00000511469 756 ntTSL 3 BASIC26.4■■□□□ 1.82
BRD4O60885 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC26.4■■□□□ 1.82
BRD4O60885 AP003041.3-201ENST00000527151 707 ntBASIC26.4■■□□□ 1.82
BRD4O60885 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC26.4■■□□□ 1.82
BRD4O60885 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
BRD4O60885 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
BRD4O60885 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC26.4■■□□□ 1.82
BRD4O60885 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC26.4■■□□□ 1.82
BRD4O60885 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
BRD4O60885 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.39■■□□□ 1.82
BRD4O60885 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
BRD4O60885 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
BRD4O60885 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
BRD4O60885 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
BRD4O60885 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC26.39■■□□□ 1.82
BRD4O60885 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
BRD4O60885 AP000523.1-201ENST00000398242 1049 ntBASIC26.39■■□□□ 1.82
BRD4O60885 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
BRD4O60885 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.39■■□□□ 1.82
BRD4O60885 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC26.39■■□□□ 1.82
BRD4O60885 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC26.39■■□□□ 1.82
BRD4O60885 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.81
BRD4O60885 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
BRD4O60885 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
BRD4O60885 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
BRD4O60885 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 BET1L-202ENST00000332865 533 ntTSL 5 BASIC26.38■■□□□ 1.81
BRD4O60885 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC26.38■■□□□ 1.81
BRD4O60885 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC26.38■■□□□ 1.81
BRD4O60885 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC26.38■■□□□ 1.81
BRD4O60885 USF2-205ENST00000594064 1179 ntTSL 2 BASIC26.38■■□□□ 1.81
BRD4O60885 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC26.38■■□□□ 1.81
BRD4O60885 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
BRD4O60885 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
BRD4O60885 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
BRD4O60885 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC26.37■■□□□ 1.81
BRD4O60885 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
BRD4O60885 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.37■■□□□ 1.81
BRD4O60885 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC26.37■■□□□ 1.81
BRD4O60885 AL441883.1-201ENST00000566170 1045 ntBASIC26.37■■□□□ 1.81
BRD4O60885 NEK4P2-201ENST00000580004 1012 ntBASIC26.37■■□□□ 1.81
BRD4O60885 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
BRD4O60885 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC26.37■■□□□ 1.81
BRD4O60885 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
BRD4O60885 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
BRD4O60885 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
BRD4O60885 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
BRD4O60885 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC26.36■■□□□ 1.81
BRD4O60885 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC26.36■■□□□ 1.81
BRD4O60885 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC26.36■■□□□ 1.81
BRD4O60885 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
BRD4O60885 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC26.36■■□□□ 1.81
BRD4O60885 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC26.36■■□□□ 1.81
BRD4O60885 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.36■■□□□ 1.81
BRD4O60885 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
BRD4O60885 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC26.36■■□□□ 1.81
BRD4O60885 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC26.36■■□□□ 1.81
BRD4O60885 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC26.36■■□□□ 1.81
BRD4O60885 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
BRD4O60885 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
BRD4O60885 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
BRD4O60885 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC26.36■■□□□ 1.81
BRD4O60885 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
BRD4O60885 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC26.36■■□□□ 1.81
BRD4O60885 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
BRD4O60885 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.36■■□□□ 1.81
BRD4O60885 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 DAP-202ENST00000432074 1048 ntTSL 2 BASIC26.35■■□□□ 1.81
BRD4O60885 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC26.35■■□□□ 1.81
BRD4O60885 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC26.35■■□□□ 1.81
BRD4O60885 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 METTL23-204ENST00000586752 904 ntTSL 2 BASIC26.35■■□□□ 1.81
BRD4O60885 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
BRD4O60885 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
BRD4O60885 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms