Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIPK2O43353 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RIPK2O43353 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPK2O43353 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RIPK2O43353 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RIPK2O43353 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.39■□□□□ 0.69
RIPK2O43353 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RIPK2O43353 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.39■□□□□ 0.69
RIPK2O43353 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPK2O43353 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.39■□□□□ 0.69
RIPK2O43353 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RIPK2O43353 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RIPK2O43353 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.39■□□□□ 0.69
RIPK2O43353 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.39■□□□□ 0.69
RIPK2O43353 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.39■□□□□ 0.69
RIPK2O43353 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
RIPK2O43353 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RIPK2O43353 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 AP006587.1-201ENST00000534129 1502 ntBASIC19.39■□□□□ 0.69
RIPK2O43353 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.39■□□□□ 0.69
RIPK2O43353 AC020916.1-201ENST00000587762 1774 ntBASIC19.39■□□□□ 0.69
RIPK2O43353 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.39■□□□□ 0.69
RIPK2O43353 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 AC126763.1-201ENST00000552015 2118 ntBASIC19.39■□□□□ 0.69
RIPK2O43353 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIPK2O43353 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK2O43353 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK2O43353 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK2O43353 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK2O43353 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RIPK2O43353 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK2O43353 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK2O43353 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RIPK2O43353 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.38■□□□□ 0.69
RIPK2O43353 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RIPK2O43353 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIPK2O43353 AC087623.3-201ENST00000607047 1098 ntBASIC19.38■□□□□ 0.69
RIPK2O43353 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.38■□□□□ 0.69
RIPK2O43353 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RIPK2O43353 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.37■□□□□ 0.69
RIPK2O43353 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RIPK2O43353 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.37■□□□□ 0.69
RIPK2O43353 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RIPK2O43353 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RIPK2O43353 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RIPK2O43353 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 MIR6821-201ENST00000617625 74 ntBASIC19.37■□□□□ 0.69
RIPK2O43353 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.37■□□□□ 0.69
RIPK2O43353 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK2O43353 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK2O43353 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.36■□□□□ 0.69
RIPK2O43353 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.36■□□□□ 0.69
RIPK2O43353 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.36■□□□□ 0.69
RIPK2O43353 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RIPK2O43353 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RIPK2O43353 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.36■□□□□ 0.69
RIPK2O43353 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.36■□□□□ 0.69
RIPK2O43353 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.36■□□□□ 0.69
RIPK2O43353 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.36■□□□□ 0.69
RIPK2O43353 RPS2P52-201ENST00000469610 820 ntBASIC19.36■□□□□ 0.69
RIPK2O43353 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms