Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
FOXE1O00358 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.21■□□□□ 0.51
FOXE1O00358 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXE1O00358 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXE1O00358 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXE1O00358 AC142381.4-202ENST00000563973 229 ntBASIC18.21■□□□□ 0.51
FOXE1O00358 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXE1O00358 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXE1O00358 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXE1O00358 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXE1O00358 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXE1O00358 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
FOXE1O00358 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FOXE1O00358 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
FOXE1O00358 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
FOXE1O00358 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXE1O00358 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXE1O00358 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXE1O00358 UBE2SP1-201ENST00000450587 669 ntBASIC18.2■□□□□ 0.5
FOXE1O00358 AC098590.1-201ENST00000468126 897 ntBASIC18.2■□□□□ 0.5
FOXE1O00358 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXE1O00358 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXE1O00358 AC083906.6-201ENST00000641366 219 ntBASIC18.2■□□□□ 0.5
FOXE1O00358 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXE1O00358 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
FOXE1O00358 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
FOXE1O00358 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXE1O00358 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXE1O00358 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXE1O00358 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FOXE1O00358 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
FOXE1O00358 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXE1O00358 GCSHP5-201ENST00000443090 522 ntBASIC18.19■□□□□ 0.5
FOXE1O00358 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXE1O00358 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.19■□□□□ 0.5
FOXE1O00358 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXE1O00358 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXE1O00358 AC130371.2-201ENST00000619443 611 ntBASIC18.19■□□□□ 0.5
FOXE1O00358 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXE1O00358 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 AL031598.1-201ENST00000561511 1773 ntBASIC18.19■□□□□ 0.5
FOXE1O00358 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXE1O00358 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXE1O00358 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXE1O00358 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXE1O00358 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXE1O00358 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXE1O00358 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 Z98044.1-201ENST00000632503 1764 ntBASIC18.18■□□□□ 0.5
FOXE1O00358 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXE1O00358 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXE1O00358 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.18■□□□□ 0.5
FOXE1O00358 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.18■□□□□ 0.5
FOXE1O00358 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXE1O00358 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXE1O00358 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXE1O00358 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
FOXE1O00358 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXE1O00358 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
FOXE1O00358 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXE1O00358 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXE1O00358 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXE1O00358 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXE1O00358 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FOXE1O00358 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXE1O00358 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
FOXE1O00358 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXE1O00358 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXE1O00358 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms