Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TAF4O00268 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TAF4O00268 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 AC098818.2-201ENST00000564925 2320 ntBASIC18.66■□□□□ 0.58
TAF4O00268 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 HOMER2P1-201ENST00000455653 964 ntBASIC18.66■□□□□ 0.58
TAF4O00268 AL359075.1-203ENST00000462729 1002 ntBASIC18.66■□□□□ 0.58
TAF4O00268 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.66■□□□□ 0.58
TAF4O00268 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.66■□□□□ 0.58
TAF4O00268 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.66■□□□□ 0.58
TAF4O00268 CR769767.2-201ENST00000622735 460 ntBASIC18.66■□□□□ 0.58
TAF4O00268 AC116562.4-202ENST00000641738 218 ntBASIC18.66■□□□□ 0.58
TAF4O00268 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.66■□□□□ 0.58
TAF4O00268 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TAF4O00268 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TAF4O00268 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
TAF4O00268 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.66■□□□□ 0.58
TAF4O00268 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.65■□□□□ 0.58
TAF4O00268 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.65■□□□□ 0.58
TAF4O00268 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.65■□□□□ 0.58
TAF4O00268 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TAF4O00268 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.65■□□□□ 0.58
TAF4O00268 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.65■□□□□ 0.58
TAF4O00268 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.65■□□□□ 0.58
TAF4O00268 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.65■□□□□ 0.58
TAF4O00268 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.65■□□□□ 0.58
TAF4O00268 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TAF4O00268 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TAF4O00268 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TAF4O00268 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.64■□□□□ 0.58
TAF4O00268 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TAF4O00268 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TAF4O00268 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TAF4O00268 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TAF4O00268 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TAF4O00268 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.64■□□□□ 0.57
TAF4O00268 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.64■□□□□ 0.57
TAF4O00268 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TAF4O00268 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TAF4O00268 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TAF4O00268 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TAF4O00268 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.64■□□□□ 0.57
TAF4O00268 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TAF4O00268 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.64■□□□□ 0.57
TAF4O00268 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TAF4O00268 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.63■□□□□ 0.57
TAF4O00268 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
TAF4O00268 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.63■□□□□ 0.57
TAF4O00268 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.63■□□□□ 0.57
TAF4O00268 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
TAF4O00268 AL845331.1-201ENST00000424978 1190 ntBASIC18.63■□□□□ 0.57
TAF4O00268 AC004980.1-204ENST00000429707 299 ntBASIC18.63■□□□□ 0.57
TAF4O00268 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.63■□□□□ 0.57
TAF4O00268 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.63■□□□□ 0.57
TAF4O00268 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TAF4O00268 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.63■□□□□ 0.57
TAF4O00268 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.63■□□□□ 0.57
TAF4O00268 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TAF4O00268 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms