Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 INGX-201ENST00000359239 846 ntBASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NPIPA2E9PIF3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.38■□□□□ 0.37
NPIPA2E9PIF3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 AC116562.4-202ENST00000641738 218 ntBASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 AC096733.2-201ENST00000609937 1394 ntBASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NPIPA2E9PIF3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 CCR12P-201ENST00000446203 998 ntBASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 AC104076.2-201ENST00000448912 469 ntBASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPA2E9PIF3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPA2E9PIF3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NPIPA2E9PIF3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.35■□□□□ 0.37
NPIPA2E9PIF3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPA2E9PIF3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPA2E9PIF3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
NPIPA2E9PIF3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms