Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM49D1C9J1S8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 CROCCP5-201ENST00000436658 830 ntBASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 AC092118.2-201ENST00000613495 667 ntBASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM49D1C9J1S8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 ANO7L1-203ENST00000602586 1720 ntBASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 AC092368.3-202ENST00000574180 1591 ntBASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 AL354751.1-201ENST00000412768 1863 ntBASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM49D1C9J1S8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 TUBB8P6-201ENST00000436895 1288 ntBASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM49D1C9J1S8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM49D1C9J1S8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms