Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCA1A8K7I4 AC104581.1-202ENST00000635932 2618 ntBASIC17.83■□□□□ 0.44
CLCA1A8K7I4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 AC009113.1-201ENST00000570267 2443 ntBASIC17.82■□□□□ 0.44
CLCA1A8K7I4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCA1A8K7I4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 AC005332.8-201ENST00000622750 2735 ntBASIC17.81■□□□□ 0.44
CLCA1A8K7I4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCA1A8K7I4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 AC020763.4-201ENST00000623414 4170 ntBASIC17.8■□□□□ 0.44
CLCA1A8K7I4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.8■□□□□ 0.44
CLCA1A8K7I4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCA1A8K7I4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 AL390961.4-201ENST00000623958 2535 ntBASIC17.79■□□□□ 0.44
CLCA1A8K7I4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA1A8K7I4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms