Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 TPM4P1-201ENST00000436100 807 ntBASIC19.74■□□□□ 0.75
SRRM3A6NNA2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM3A6NNA2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 POM121L13P-201ENST00000422362 380 ntBASIC19.73■□□□□ 0.75
SRRM3A6NNA2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 AC008175.2-201ENST00000612840 297 ntBASIC19.73■□□□□ 0.75
SRRM3A6NNA2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SRRM3A6NNA2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM3A6NNA2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.71■□□□□ 0.75
SRRM3A6NNA2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM3A6NNA2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRRM3A6NNA2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SRRM3A6NNA2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SRRM3A6NNA2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRRM3A6NNA2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRRM3A6NNA2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms