Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CPSF4LA6NMK7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF4LA6NMK7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 POM121L13P-201ENST00000422362 380 ntBASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 PRKY-204ENST00000533551 1019 ntBASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF4LA6NMK7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.58■□□□□ 0.41
CPSF4LA6NMK7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPSF4LA6NMK7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.58■□□□□ 0.41
CPSF4LA6NMK7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 UNC93B5-201ENST00000530315 699 ntBASIC17.58■□□□□ 0.4
CPSF4LA6NMK7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms