Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 AD000864.1-201ENST00000624076 2295 ntBASIC15.52■□□□□ 0.08
RNF222A6NCQ9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 HLA-G-202ENST00000376815 851 ntBASIC15.52■□□□□ 0.08
RNF222A6NCQ9 HLA-G-203ENST00000376818 1127 ntBASIC15.52■□□□□ 0.08
RNF222A6NCQ9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 YBX1P1-201ENST00000445822 960 ntBASIC15.52■□□□□ 0.08
RNF222A6NCQ9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 CCDC92B-201ENST00000575506 885 ntBASIC15.52■□□□□ 0.08
RNF222A6NCQ9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF222A6NCQ9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF222A6NCQ9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 AC012414.1-201ENST00000556676 535 ntBASIC15.51■□□□□ 0.07
RNF222A6NCQ9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 HTR7P1-202ENST00000624664 4411 ntBASIC15.51■□□□□ 0.07
RNF222A6NCQ9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF222A6NCQ9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.5■□□□□ 0.07
RNF222A6NCQ9 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF222A6NCQ9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms