Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 LINC00265-3P-201ENST00000447588 903 ntBASIC22.27■■□□□ 1.16
SSC5DA1L4H1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SSC5DA1L4H1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
SSC5DA1L4H1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 TOB2P1-201ENST00000469761 992 ntBASIC22.26■■□□□ 1.15
SSC5DA1L4H1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
SSC5DA1L4H1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 TSPY12P-201ENST00000421279 868 ntBASIC22.25■■□□□ 1.15
SSC5DA1L4H1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 AP000867.3-201ENST00000524675 377 ntBASIC22.25■■□□□ 1.15
SSC5DA1L4H1 AC012615.1-201ENST00000565797 1299 ntBASIC22.25■■□□□ 1.15
SSC5DA1L4H1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
SSC5DA1L4H1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 AC106795.1-205ENST00000512851 1056 ntBASIC22.24■■□□□ 1.15
SSC5DA1L4H1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 AL160237.2-201ENST00000556165 472 ntBASIC22.24■■□□□ 1.15
SSC5DA1L4H1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 AC112497.1-201ENST00000624824 639 ntBASIC22.24■■□□□ 1.15
SSC5DA1L4H1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.24■■□□□ 1.15
SSC5DA1L4H1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 AC099778.1-201ENST00000568593 1911 ntBASIC22.23■■□□□ 1.15
SSC5DA1L4H1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 AP002469.2-201ENST00000531724 424 ntBASIC22.23■■□□□ 1.15
SSC5DA1L4H1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 AL671883.3-201ENST00000603274 991 ntBASIC22.23■■□□□ 1.15
SSC5DA1L4H1 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.23■■□□□ 1.15
SSC5DA1L4H1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSC5DA1L4H1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSC5DA1L4H1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSC5DA1L4H1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SSC5DA1L4H1 KRT18P31-201ENST00000506277 1292 ntBASIC22.22■■□□□ 1.15
SSC5DA1L4H1 FOSL1P1-201ENST00000511041 816 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms