Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV25A0A0B4J276 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 KRT8P11-201ENST00000409686 1436 ntBASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 TSPY23P-201ENST00000440136 739 ntBASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV25A0A0B4J276 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 NAPSB-206ENST00000562112 1266 ntBASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV25A0A0B4J276 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 SLC25A1P2-201ENST00000430693 912 ntBASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 CCR12P-201ENST00000446203 998 ntBASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 AC128688.1-201ENST00000487626 519 ntBASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV25A0A0B4J276 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV25A0A0B4J276 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV25A0A0B4J276 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV25A0A0B4J276 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV25A0A0B4J276 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms