Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV27A0A087WT01 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV27A0A087WT01 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV27A0A087WT01 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV27A0A087WT01 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV27A0A087WT01 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV27A0A087WT01 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV27A0A087WT01 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 AC008403.3-201ENST00000598924 454 ntBASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV27A0A087WT01 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 AL031598.1-201ENST00000561511 1773 ntBASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 FEM1AP3-201ENST00000403722 1741 ntBASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 NBPF21P-201ENST00000425093 1451 ntBASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV27A0A087WT01 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 RNA5SP413-201ENST00000516373 109 ntBASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 AC009113.1-201ENST00000570267 2443 ntBASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms