Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RPL23AP93-201ENST00000440847 484 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AL031274.1-201ENST00000450334 232 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC087588.1-201ENST00000462203 316 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC069499.1-201ENST00000489433 509 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 VN1R85P-201ENST00000601587 426 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 MIR4272-201ENST00000635924 64 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 Z99571.1-201ENST00000636677 394 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AC008669.1-201ENST00000565823 2178 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
USP17L3A6NCW0 AL136164.3-201ENST00000624429 3978 ntBASIC5.57□□□□□ -1.52
USP17L3A6NCW0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AL365440.1-201ENST00000436135 2167 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 RNU6-874P-201ENST00000362390 105 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 Y_RNA.324-201ENST00000365165 102 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 RNA5SP187-201ENST00000384400 119 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 MIR301A-201ENST00000385261 86 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AC007738.1-201ENST00000413892 348 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 CYCSP33-201ENST00000414485 327 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AL356968.1-201ENST00000416622 474 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AC108032.1-201ENST00000416706 207 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AL353997.1-201ENST00000432936 108 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AC011998.1-201ENST00000433403 117 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 TDGF1P1-201ENST00000445734 527 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 PTMAP3-201ENST00000447474 330 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 BTF3P6-201ENST00000448054 499 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 PCNPP5-201ENST00000452246 481 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 SNORA31.9-201ENST00000516429 84 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 SNORA40.14-201ENST00000516543 86 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 RNU7-4P-201ENST00000516961 62 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 RNA5SP230-201ENST00000517039 122 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 RNU6-1315P-201ENST00000517187 99 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 MIR4273-201ENST00000582824 84 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 ZYXP1-201ENST00000617638 118 ntBASIC5.56□□□□□ -1.52
USP17L3A6NCW0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP17L3A6NCW0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 RNU6-173P-201ENST00000364215 104 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 RN7SKP186-201ENST00000365371 303 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 SNORA37-201ENST00000384504 129 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AL138885.1-201ENST00000405921 675 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 RNU2-3P-201ENST00000410144 191 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 RN7SL98P-201ENST00000462271 300 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AC108145.1-201ENST00000503770 153 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AC022447.4-201ENST00000504053 364 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 Y_RNA.715-201ENST00000517082 110 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AC005357.1-201ENST00000588399 301 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 IPO5P1-202ENST00000600039 287 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 RMST_4.1-201ENST00000616886 107 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AL023881.1-201ENST00000621088 301 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 MIR8062-201ENST00000621515 85 ntBASIC5.55□□□□□ -1.52
USP17L3A6NCW0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP17L3A6NCW0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP17L3A6NCW0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
USP17L3A6NCW0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP17L3A6NCW0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP17L3A6NCW0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP17L3A6NCW0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms