Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC090804.1-201ENST00000448870 490 ntBASIC5.9□□□□□ -1.46
LRCH3Q96II8 HIGD1AP3-201ENST00000515857 278 ntBASIC5.9□□□□□ -1.46
LRCH3Q96II8 MIR2117-201ENST00000516780 80 ntBASIC5.9□□□□□ -1.46
LRCH3Q96II8 RNU6-840P-201ENST00000517275 65 ntBASIC5.9□□□□□ -1.46
LRCH3Q96II8 AC005046.1-201ENST00000608515 625 ntBASIC5.9□□□□□ -1.46
LRCH3Q96II8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRCH3Q96II8 AP004607.3-201ENST00000530354 3915 ntBASIC5.9□□□□□ -1.47
LRCH3Q96II8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LRCH3Q96II8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRCH3Q96II8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
LRCH3Q96II8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
LRCH3Q96II8 NCAPGP1-201ENST00000505112 1814 ntBASIC5.9□□□□□ -1.47
LRCH3Q96II8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.9□□□□□ -1.47
LRCH3Q96II8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
LRCH3Q96II8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.9□□□□□ -1.47
LRCH3Q96II8 AC097461.1-201ENST00000568928 2821 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRCH3Q96II8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRCH3Q96II8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRCH3Q96II8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRCH3Q96II8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.89□□□□□ -1.47
LRCH3Q96II8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRCH3Q96II8 AC232271.1-201ENST00000602455 2715 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 RNU6-275P-201ENST00000364910 107 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 SNORA37-201ENST00000384504 129 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 RNU6-476P-201ENST00000384726 107 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 SNORA40.19-201ENST00000390846 128 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 RNA5SP213-201ENST00000391031 106 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 AL078599.1-201ENST00000402075 293 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 RPL21P67-201ENST00000402896 478 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 AP000907.1-201ENST00000428428 510 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 AC009296.1-201ENST00000443146 155 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 APOOP4-201ENST00000513530 597 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 AC090617.7-201ENST00000623952 126 ntBASIC5.89□□□□□ -1.47
LRCH3Q96II8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRCH3Q96II8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.89□□□□□ -1.47
LRCH3Q96II8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
LRCH3Q96II8 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
LRCH3Q96II8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
LRCH3Q96II8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LRCH3Q96II8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRCH3Q96II8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
LRCH3Q96II8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 RNU4-17P-201ENST00000365598 141 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 RNU6-395P-201ENST00000365662 106 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 RNU6-147P-201ENST00000383983 107 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 RNU6-76P-201ENST00000384060 104 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 RNU6-821P-201ENST00000390995 107 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 SNORA57.1-201ENST00000391227 145 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 RNA5SP89-201ENST00000410300 108 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 SSXP9-201ENST00000417503 292 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 AL357134.1-201ENST00000445848 426 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 EEF1A1P1-201ENST00000447052 739 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 AC074290.1-201ENST00000448883 135 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 PPIAP21-201ENST00000464473 501 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 AC005476.1-201ENST00000554427 397 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 TUG1_4.1-201ENST00000619464 181 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.88□□□□□ -1.47
LRCH3Q96II8 MTND5P32-201ENST00000560711 1802 ntBASIC5.88□□□□□ -1.47
LRCH3Q96II8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRCH3Q96II8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRCH3Q96II8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LRCH3Q96II8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRCH3Q96II8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRCH3Q96II8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRCH3Q96II8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRCH3Q96II8 Y_RNA.33-201ENST00000362591 102 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 RNA5SP455-201ENST00000365190 119 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 RNU1-139P-201ENST00000391307 165 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 AL354710.1-201ENST00000453641 246 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 AP000870.1-201ENST00000472927 406 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 RAC1P5-201ENST00000512182 576 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.87□□□□□ -1.47
LRCH3Q96II8 AC115990.1-201ENST00000526957 301 ntBASIC5.87□□□□□ -1.47
LRCH3Q96II8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.87□□□□□ -1.47
LRCH3Q96II8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.87□□□□□ -1.47
LRCH3Q96II8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.87□□□□□ -1.47
LRCH3Q96II8 AC008121.1-201ENST00000603244 268 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms