Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.9□□□□□ -1.62
SHKBP1Q8TBC3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHKBP1Q8TBC3 ZFRP1-201ENST00000457579 2970 ntBASIC4.9□□□□□ -1.62
SHKBP1Q8TBC3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.9□□□□□ -1.62
SHKBP1Q8TBC3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 XIAPP3-201ENST00000312918 795 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 SNORD82-201ENST00000365530 70 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-946P-201ENST00000383878 107 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-378P-201ENST00000384324 107 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-121P-201ENST00000410525 99 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 RNU2-25P-201ENST00000411041 191 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 SYF2P2-201ENST00000417620 583 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 AL353997.1-201ENST00000432936 108 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 AL162591.2-201ENST00000449634 317 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 OR2AQ1P-201ENST00000451972 200 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 RN7SKP122-201ENST00000515923 296 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 RNU4-71P-201ENST00000516258 113 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 HMGN1P28-201ENST00000521340 364 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 AL122126.1-201ENST00000546905 1318 ntBASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHKBP1Q8TBC3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AP001273.1-201ENST00000624493 3152 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 MIR335-201ENST00000362173 94 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.151-201ENST00000363566 112 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 SNORD50B-201ENST00000364995 70 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 SMIM11P1-201ENST00000369586 178 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-48P-201ENST00000384161 107 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AL590762.2-201ENST00000395798 571 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-1203P-201ENST00000410703 110 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AC069218.2-201ENST00000411665 344 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AL139156.1-201ENST00000412785 841 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AL451074.5-201ENST00000415894 435 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 UBE2V1P4-201ENST00000425374 344 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AC234779.1-201ENST00000425910 285 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RPS27AP1-201ENST00000475545 471 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AC109329.1-201ENST00000518744 317 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RPL23AP53-201ENST00000521854 457 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 CYCSP40-201ENST00000575927 294 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AC093227.2-201ENST00000589357 285 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RNF138P2-201ENST00000603490 592 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 AC005191.1-201ENST00000603950 358 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 U3.53-201ENST00000628922 216 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 MIR6830-201ENST00000636015 70 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 ZNF137P-201ENST00000456718 1920 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 DDX18P3-201ENST00000404856 2007 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 RAD17P1-201ENST00000418130 2042 ntBASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SHKBP1Q8TBC3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.65-201ENST00000362846 100 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.84-201ENST00000363011 104 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-611P-201ENST00000384276 104 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-174P-201ENST00000410406 106 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-1140P-201ENST00000410517 106 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 RPS17P13-201ENST00000448974 407 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 RN7SL432P-201ENST00000484057 298 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 AC135721.1-201ENST00000497954 479 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 RNU7-4P-201ENST00000516961 62 ntBASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.88□□□□□ -1.63
SHKBP1Q8TBC3 AP002770.2-201ENST00000543613 532 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms