Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
USPL1Q5W0Q7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
USPL1Q5W0Q7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
USPL1Q5W0Q7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USPL1Q5W0Q7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
USPL1Q5W0Q7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USPL1Q5W0Q7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USPL1Q5W0Q7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 MAPK10-286ENST00000641208 8747 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 SMG1P4-204ENST00000523028 4131 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 SNORD3E-201ENST00000362899 217 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RNU6-434P-201ENST00000384376 107 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AL121834.1-202ENST00000404494 277 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RNU6ATAC-201ENST00000408749 126 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1304P-201ENST00000411374 106 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AL035666.1-201ENST00000446195 348 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 MRPS31P2-201ENST00000451581 518 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RPL23AP2-201ENST00000471227 466 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RBBP4P6-201ENST00000508098 202 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RN7SKP295-201ENST00000517264 153 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 PTP4A1P6-201ENST00000531034 478 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AC006272.2-201ENST00000594725 163 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AL034351.1-201ENST00000605288 668 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AL589994.2-201ENST00000621124 579 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 CR392039.5-201ENST00000623201 510 ntBASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.39□□□□□ -1.55
USPL1Q5W0Q7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RNU6-562P-201ENST00000362731 107 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 Y_RNA.401-201ENST00000383965 117 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1040P-201ENST00000383974 107 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RNU6-393P-201ENST00000384475 107 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AL356057.3-201ENST00000402607 340 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 SNORA11.1-201ENST00000408133 129 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RPLP0P7-201ENST00000416050 667 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC113618.1-201ENST00000416747 285 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC093106.2-201ENST00000428212 385 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC104058.1-201ENST00000448028 297 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RPL23AP81-201ENST00000455252 467 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 MTCO3P10-201ENST00000455912 772 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 DYNLL1P5-201ENST00000467158 270 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC106872.2-201ENST00000494303 480 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 PTP4A1P4-201ENST00000512479 322 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1016P-201ENST00000516689 94 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 RN7SKP234-201ENST00000517173 224 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AL117187.1-201ENST00000555482 181 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 HSPE1P5-201ENST00000561489 272 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC007938.3-201ENST00000604965 623 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC083806.3-201ENST00000614016 455 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC091905.2-201ENST00000623143 306 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 AC012442.3-202ENST00000636742 206 ntBASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USPL1Q5W0Q7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1309P-201ENST00000363305 108 ntBASIC5.37□□□□□ -1.55
USPL1Q5W0Q7 Y_RNA.158-201ENST00000363651 101 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms