RNA–Protein interactions for RNA: ENST00000512479.1

PTP4A1P4-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 4, humanhuman

BASIC

Gene PTP4A1P4, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P4-201ENST00000512479 AEBP2Q6ZN18 517 aaPredicted RBP24.55■■□□□ 1.52
PTP4A1P4-201ENST00000512479 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
PTP4A1P4-201ENST00000512479 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
PTP4A1P4-201ENST00000512479 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
PTP4A1P4-201ENST00000512479 POTEDQ86YR6 584 aa20.38■□□□□ 0.85
PTP4A1P4-201ENST00000512479 FOXD1Q16676 465 aa19.85■□□□□ 0.77
PTP4A1P4-201ENST00000512479 MSH5O43196 834 aa19.09■□□□□ 0.65
PTP4A1P4-201ENST00000512479 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
PTP4A1P4-201ENST00000512479 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
PTP4A1P4-201ENST00000512479 ADRA2BP18089 450 aa17.61■□□□□ 0.41
PTP4A1P4-201ENST00000512479 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
PTP4A1P4-201ENST00000512479 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
PTP4A1P4-201ENST00000512479 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
PTP4A1P4-201ENST00000512479 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
PTP4A1P4-201ENST00000512479 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
PTP4A1P4-201ENST00000512479 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
PTP4A1P4-201ENST00000512479 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
PTP4A1P4-201ENST00000512479 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
PTP4A1P4-201ENST00000512479 POTEHQ6S545 545 aa15.79■□□□□ 0.12
PTP4A1P4-201ENST00000512479 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
PTP4A1P4-201ENST00000512479 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
PTP4A1P4-201ENST00000512479 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
PTP4A1P4-201ENST00000512479 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
PTP4A1P4-201ENST00000512479 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
PTP4A1P4-201ENST00000512479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTP4A1P4-201ENST00000512479 DSG3P32926 999 aa14.74□□□□□ -0.05
PTP4A1P4-201ENST00000512479 CAPN15O75808 1086 aa14.64□□□□□ -0.07
PTP4A1P4-201ENST00000512479 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.09
PTP4A1P4-201ENST00000512479 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
PTP4A1P4-201ENST00000512479 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
PTP4A1P4-201ENST00000512479 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
PTP4A1P4-201ENST00000512479 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
PTP4A1P4-201ENST00000512479 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
PTP4A1P4-201ENST00000512479 ABCB7O75027 752 aa14.15□□□□□ -0.14
PTP4A1P4-201ENST00000512479 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
PTP4A1P4-201ENST00000512479 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
PTP4A1P4-201ENST00000512479 APLP2Q06481 763 aa14.06□□□□□ -0.16
PTP4A1P4-201ENST00000512479 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.17
PTP4A1P4-201ENST00000512479 HAX1O00165 279 aa13.76□□□□□ -0.21
PTP4A1P4-201ENST00000512479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
PTP4A1P4-201ENST00000512479 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
PTP4A1P4-201ENST00000512479 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
PTP4A1P4-201ENST00000512479 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
PTP4A1P4-201ENST00000512479 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
PTP4A1P4-201ENST00000512479 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
PTP4A1P4-201ENST00000512479 PLSCR2Q9NRY7 297 aa13.51□□□□□ -0.25
PTP4A1P4-201ENST00000512479 POLA2Q14181 598 aa13.48□□□□□ -0.25
PTP4A1P4-201ENST00000512479 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
PTP4A1P4-201ENST00000512479 LHX8Q68G74 356 aa13.42□□□□□ -0.26
PTP4A1P4-201ENST00000512479 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTP4A1P4-201ENST00000512479 EVX2Q03828 476 aa13.38□□□□□ -0.27
PTP4A1P4-201ENST00000512479 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
PTP4A1P4-201ENST00000512479 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
PTP4A1P4-201ENST00000512479 GABBR2O75899 941 aa13.09□□□□□ -0.31
PTP4A1P4-201ENST00000512479 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
PTP4A1P4-201ENST00000512479 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
PTP4A1P4-201ENST00000512479 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
PTP4A1P4-201ENST00000512479 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
PTP4A1P4-201ENST00000512479 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
PTP4A1P4-201ENST00000512479 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
PTP4A1P4-201ENST00000512479 KCNA4P22459 653 aa12.72□□□□□ -0.37
PTP4A1P4-201ENST00000512479 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
PTP4A1P4-201ENST00000512479 POTEMA6NI47 508 aa12.7□□□□□ -0.38
PTP4A1P4-201ENST00000512479 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
PTP4A1P4-201ENST00000512479 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
PTP4A1P4-201ENST00000512479 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
PTP4A1P4-201ENST00000512479 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
PTP4A1P4-201ENST00000512479 CLCN6P51797 869 aa12.61□□□□□ -0.39
PTP4A1P4-201ENST00000512479 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
PTP4A1P4-201ENST00000512479 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
PTP4A1P4-201ENST00000512479 DCBLD2Q96PD2 775 aa12.59□□□□□ -0.39
PTP4A1P4-201ENST00000512479 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
PTP4A1P4-201ENST00000512479 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
PTP4A1P4-201ENST00000512479 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
PTP4A1P4-201ENST00000512479 FBLN2P98095 1184 aa12.42□□□□□ -0.42
PTP4A1P4-201ENST00000512479 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
PTP4A1P4-201ENST00000512479 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
PTP4A1P4-201ENST00000512479 SSUH2Q9Y2M2 353 aa12.3□□□□□ -0.44
PTP4A1P4-201ENST00000512479 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
PTP4A1P4-201ENST00000512479 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
PTP4A1P4-201ENST00000512479 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
PTP4A1P4-201ENST00000512479 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
PTP4A1P4-201ENST00000512479 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
PTP4A1P4-201ENST00000512479 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
PTP4A1P4-201ENST00000512479 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
PTP4A1P4-201ENST00000512479 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTP4A1P4-201ENST00000512479 MAMSTRQ6ZN01 415 aa12.08□□□□□ -0.48
PTP4A1P4-201ENST00000512479 LCE2DQ5TA82 110 aaPredicted RBP12.05□□□□□ -0.48
PTP4A1P4-201ENST00000512479 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
PTP4A1P4-201ENST00000512479 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
PTP4A1P4-201ENST00000512479 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
PTP4A1P4-201ENST00000512479 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
PTP4A1P4-201ENST00000512479 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
PTP4A1P4-201ENST00000512479 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
PTP4A1P4-201ENST00000512479 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
PTP4A1P4-201ENST00000512479 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
PTP4A1P4-201ENST00000512479 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
PTP4A1P4-201ENST00000512479 C7P10643 843 aa11.92□□□□□ -0.5
PTP4A1P4-201ENST00000512479 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
PTP4A1P4-201ENST00000512479 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms