Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP001148.1-201ENST00000624124 2359 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC116096.1-201ENST00000566804 2314 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 MAPK10-304ENST00000641341 3984 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC02555-201ENST00000563933 1951 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 RLIMP1-201ENST00000339626 1680 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 RNY1-201ENST00000364228 113 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 RN7SKP227-201ENST00000364445 330 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AL358472.1-201ENST00000431295 329 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 RPL36AP39-201ENST00000445859 318 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 FABP5P15-201ENST00000453566 214 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 ISCUP1-201ENST00000454451 448 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC092754.1-201ENST00000472975 479 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC026784.1-201ENST00000507986 352 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 SCARNA15.2-201ENST00000516409 127 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.706-201ENST00000516933 99 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR3921-201ENST00000577308 85 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 RN7SL356P-201ENST00000582228 248 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 SRGNP1-201ENST00000603392 451 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC108738.1-201ENST00000603703 237 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AC010900.2-201ENST00000604508 210 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 RNA5SP108-201ENST00000605921 117 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.772-201ENST00000606692 102 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 AL360181.4-201ENST00000621752 134 ntBASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA11Q9Y5H2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHGA11Q9Y5H2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.21□□□□□ -1.57
PCDHGA11Q9Y5H2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHGA11Q9Y5H2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHGA11Q9Y5H2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PCDHGA11Q9Y5H2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
PCDHGA11Q9Y5H2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU1-19P-201ENST00000363306 165 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 RNA5SP235-201ENST00000365411 114 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.358-201ENST00000365491 99 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 MIR215-201ENST00000384858 110 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 MIR10A-201ENST00000385043 110 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 SNORA12.2-201ENST00000391040 156 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 SNORD58.1-201ENST00000391313 66 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 RPS29P13-201ENST00000402041 169 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 MRPL35P1-201ENST00000404272 572 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AL603910.2-201ENST00000407268 136 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AL445433.1-201ENST00000457507 257 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU7-87P-201ENST00000459343 62 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AC022133.1-201ENST00000490961 571 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AL359273.1-201ENST00000510918 627 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU6-377P-201ENST00000515965 102 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 SYF2P1-201ENST00000550658 413 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AL390726.5-202ENST00000564800 256 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AP000769.2-201ENST00000602344 396 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AC244107.2-201ENST00000611773 76 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AC127024.6-201ENST00000621598 424 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 DDX18P3-201ENST00000404856 2007 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 AC083843.3-201ENST00000623679 2186 ntBASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA11Q9Y5H2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms