Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL15A1P39059 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL15A1P39059 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL15A1P39059 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.12□□□□□ -1.75
COL15A1P39059 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.12□□□□□ -1.75
COL15A1P39059 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL15A1P39059 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.12□□□□□ -1.75
COL15A1P39059 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.12□□□□□ -1.75
COL15A1P39059 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.12□□□□□ -1.75
COL15A1P39059 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL15A1P39059 AP002088.1-201ENST00000382740 395 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 SNORA54-201ENST00000384281 123 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 GSTA9P-201ENST00000406231 611 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.12□□□□□ -1.75
COL15A1P39059 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.12□□□□□ -1.75
COL15A1P39059 AC119618.1-201ENST00000434191 222 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 DNAJC19P4-201ENST00000440115 345 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 USP9YP15-201ENST00000442391 422 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.12□□□□□ -1.75
COL15A1P39059 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL15A1P39059 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.12□□□□□ -1.75
COL15A1P39059 AC091133.4-201ENST00000511142 308 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 AP003497.1-201ENST00000528472 562 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.12□□□□□ -1.75
COL15A1P39059 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.12□□□□□ -1.75
COL15A1P39059 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.12□□□□□ -1.75
COL15A1P39059 AL356432.3-201ENST00000568952 465 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 AC015917.1-201ENST00000579654 510 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.12□□□□□ -1.75
COL15A1P39059 AL139286.1-201ENST00000604465 483 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 AC055876.5-201ENST00000605667 259 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 AC007684.1-201ENST00000609671 477 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 BX664608.1-201ENST00000610519 487 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 U4.5-201ENST00000617137 123 ntBASIC4.12□□□□□ -1.75
COL15A1P39059 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.12□□□□□ -1.75
COL15A1P39059 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.12□□□□□ -1.75
COL15A1P39059 AC009902.3-201ENST00000606235 2172 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
COL15A1P39059 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL15A1P39059 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL15A1P39059 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL15A1P39059 SNORA7.4-201ENST00000384249 137 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 RNU6-301P-201ENST00000384277 107 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 RNU6-114P-201ENST00000384704 105 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL15A1P39059 RNU2-47P-201ENST00000410649 186 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 PIGFP2-201ENST00000421400 651 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 MTND3P21-201ENST00000433774 331 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AC140076.1-201ENST00000449897 361 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AC093392.2-201ENST00000450682 337 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.11□□□□□ -1.75
COL15A1P39059 RBM43P1-201ENST00000476891 1081 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 KCTD9P5-201ENST00000504141 1170 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.11□□□□□ -1.75
COL15A1P39059 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.11□□□□□ -1.75
COL15A1P39059 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.11□□□□□ -1.75
COL15A1P39059 PSMA2P1-201ENST00000526365 646 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 SETP7-201ENST00000552169 453 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.11□□□□□ -1.75
COL15A1P39059 AL031176.1-201ENST00000604554 466 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AL355472.4-201ENST00000610233 626 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AL592295.2-201ENST00000612578 206 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AL713922.2-201ENST00000619384 716 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 AC112204.3-201ENST00000623822 332 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 CR381653.2-201ENST00000624041 768 ntBASIC4.11□□□□□ -1.75
COL15A1P39059 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL15A1P39059 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL15A1P39059 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL15A1P39059 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL15A1P39059 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL15A1P39059 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL15A1P39059 MIR30E-201ENST00000362104 92 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL15A1P39059 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL15A1P39059 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL15A1P39059 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.1□□□□□ -1.75
COL15A1P39059 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.1□□□□□ -1.75
COL15A1P39059 RPL35AP12-201ENST00000425362 338 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 AC006548.1-201ENST00000427470 102 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 RPL31P35-201ENST00000431058 377 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.1□□□□□ -1.75
COL15A1P39059 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.1□□□□□ -1.75
COL15A1P39059 AL049734.2-201ENST00000441066 616 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.1□□□□□ -1.75
COL15A1P39059 ELOCP23-201ENST00000452014 332 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.1□□□□□ -1.75
COL15A1P39059 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.1□□□□□ -1.75
COL15A1P39059 RNU2-58P-201ENST00000516403 183 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.1□□□□□ -1.75
COL15A1P39059 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL15A1P39059 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.1□□□□□ -1.75
COL15A1P39059 TGIF1P1-201ENST00000558095 802 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 AC034105.3-201ENST00000565294 442 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 MIR4801-201ENST00000582704 82 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 UBE2L4-201ENST00000587688 464 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 IGHV3-29-201ENST00000604817 344 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 AL365503.1-201ENST00000605247 905 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 MIR98-201ENST00000606724 119 ntBASIC4.1□□□□□ -1.75
COL15A1P39059 AF250324.2-201ENST00000608299 610 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms