Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.25□□□□□ -2.21
CACNA1AO00555 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.25□□□□□ -2.21
CACNA1AO00555 AP001029.3-201ENST00000588063 596 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 AC091488.1-201ENST00000604239 660 ntBASIC1.25□□□□□ -2.21
CACNA1AO00555 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.25□□□□□ -2.21
CACNA1AO00555 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CACNA1AO00555 SSR1P1-201ENST00000407630 814 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 RPL7P34-201ENST00000433316 712 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 AC093716.1-201ENST00000435923 377 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 GTF2IP7-202ENST00000436677 309 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 USP9YP7-201ENST00000436723 430 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.24□□□□□ -2.21
CACNA1AO00555 USP9YP32-201ENST00000452432 430 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 AC008379.1-201ENST00000463655 464 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 AC104692.1-201ENST00000472406 90 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.24□□□□□ -2.21
CACNA1AO00555 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.24□□□□□ -2.21
CACNA1AO00555 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.24□□□□□ -2.21
CACNA1AO00555 AC005156.1-201ENST00000613371 573 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CACNA1AO00555 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.24□□□□□ -2.21
CACNA1AO00555 RNU6-461P-201ENST00000364195 107 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 RNU1-78P-201ENST00000391248 165 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 AL022718.1-201ENST00000412004 84 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.24□□□□□ -2.21
CACNA1AO00555 ARF4P2-201ENST00000430209 526 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.24□□□□□ -2.21
CACNA1AO00555 AC018437.1-201ENST00000492214 406 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.24□□□□□ -2.21
CACNA1AO00555 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.24□□□□□ -2.21
CACNA1AO00555 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.24□□□□□ -2.21
CACNA1AO00555 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
CACNA1AO00555 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CACNA1AO00555 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CACNA1AO00555 RNU6-17P-201ENST00000384245 107 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 RNU6-18P-201ENST00000384527 107 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 AC244636.1-201ENST00000421152 228 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.23□□□□□ -2.21
CACNA1AO00555 TRBVB-201ENST00000477100 408 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 GTF2IP9-201ENST00000502460 301 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.23□□□□□ -2.21
CACNA1AO00555 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.23□□□□□ -2.21
CACNA1AO00555 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.23□□□□□ -2.21
CACNA1AO00555 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.23□□□□□ -2.21
CACNA1AO00555 SNORD48-201ENST00000364953 64 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 DYNLT3P1-201ENST00000378574 347 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 RNU6-700P-201ENST00000391043 107 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CACNA1AO00555 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.23□□□□□ -2.21
CACNA1AO00555 CBX3P7-201ENST00000532876 502 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 AL137847.3-201ENST00000611521 109 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 SNORA50A-202ENST00000629536 136 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 AC111188.2-201ENST00000529697 1387 ntBASIC1.23□□□□□ -2.21
CACNA1AO00555 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.23□□□□□ -2.21
CACNA1AO00555 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.22□□□□□ -2.21
CACNA1AO00555 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CACNA1AO00555 Y_RNA.100-201ENST00000363141 102 ntBASIC1.22□□□□□ -2.21
CACNA1AO00555 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.22□□□□□ -2.21
CACNA1AO00555 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.22□□□□□ -2.21
CACNA1AO00555 RNU1-40P-201ENST00000516816 164 ntBASIC1.22□□□□□ -2.21
CACNA1AO00555 RNU1-97P-201ENST00000516872 164 ntBASIC1.22□□□□□ -2.21
CACNA1AO00555 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.22□□□□□ -2.21
CACNA1AO00555 AC108706.1-201ENST00000611053 297 ntBASIC1.22□□□□□ -2.21
CACNA1AO00555 AC010889.1-201ENST00000566193 2666 ntBASIC1.22□□□□□ -2.21
CACNA1AO00555 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.22□□□□□ -2.21
CACNA1AO00555 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CACNA1AO00555 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CACNA1AO00555 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CACNA1AO00555 XIAPP3-201ENST00000312918 795 ntBASIC1.22□□□□□ -2.21
CACNA1AO00555 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.22□□□□□ -2.21
CACNA1AO00555 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.22□□□□□ -2.21
CACNA1AO00555 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.22□□□□□ -2.21
CACNA1AO00555 MIR4448-201ENST00000584360 86 ntBASIC1.22□□□□□ -2.21
CACNA1AO00555 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1AO00555 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1AO00555 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1AO00555 MIR936-201ENST00000401264 98 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 UBE2V2P1-201ENST00000434717 398 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 RPL35AP22-201ENST00000436855 335 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 UBE2V1P13-201ENST00000436983 439 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1AO00555 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1AO00555 SNORA26.7-201ENST00000391288 122 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 SNORA79B-201ENST00000410557 148 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.21□□□□□ -2.22
CACNA1AO00555 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.21□□□□□ -2.22
CACNA1AO00555 RNU6-347P-201ENST00000516658 105 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 OR8X1P-201ENST00000534542 869 ntBASIC1.21□□□□□ -2.22
CACNA1AO00555 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.21□□□□□ -2.22
CACNA1AO00555 HAUS6P2-201ENST00000433254 2404 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CACNA1AO00555 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.2□□□□□ -2.22
CACNA1AO00555 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1AO00555 AC090071.1-201ENST00000507713 644 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 VTA1P2-201ENST00000520205 911 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.2□□□□□ -2.22
CACNA1AO00555 AC034268.2-201ENST00000571784 482 ntBASIC1.2□□□□□ -2.22
CACNA1AO00555 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1AO00555 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms